| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_1007 |
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| Symbol | |
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| ID | 6206385 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 1240776 |
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| End bp | 1241639 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641690630 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_001817895 |
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| Protein GI | 182412829 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0114104 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTTCCA AGCCCGATCT CACGACGCTC GTGAACCGGT TGCCGCAGCC GCCGCATCCG
CTGATGGGCC GGCGGCCGGG CGCGGTGGCG CTGCCCGACA ACATCGTGTG CTTCCAGCGC
CGCGCCGCAT CGGAGCTGAA CCGTCCGCGG CGCGGGCGGG CGCTGCACCA TCGTTGCGTG
CTTATCCTCG CGCTGCGCAC GGCGGTGACG GTGTGCGTCG ACGATCGCGT GCTGCGACTC
GGCGCGGGTG AGGGACTCAT CGTGCTGCCG TTCCAGTTTC ACCATTACCT GCATCCGCAG
AGTGAGAGCA TGCTGTGGTT GTTCGTGACC TTCGACCTGG CGGACACGAG CCAGCTCGCG
TCGCTGCGGT TCAAACCCTT TCCGCTCACG CCTCCGGTGC AGGGCGTGGC GACGGAGTTT
CTCGCGGCCT ATGAGCAGGA GGGTCGCGAG TCCGACCTGC CGGCGCTGCT GCTCGCGCTG
CTGCTGGCGC GCGTGCGCCG GCTCGCCCGG ACGCCGCGCC GCGCGCCGCT CGAACCCGAG
GCGTCGCCCG GCGTGGTGAT GCAGGTGAAC CAGCTTGCGC AGAAAGGTCC GGAGCGAAGC
GGGATCAAGC AGATTGCCCA CACGCTCGGC ATCAGCCCGA GTCATTTGCG CGCGCGGTTC
CGGGCCTCGT GCGGCGTCAG CATCGGCCGG CACTTGCGTC GGCTGCGGCT GGAGAAGGCC
TGCGGGCTGC TGCGGCTGAC GCCGAACCGC GTGTCGGAAG TGGCGGAGCA GTGCGGGTTC
AATTCGATCT ATCACTTCAG CCGCGCGTTT CGGGCGGCGT ATGGCATTTC GCCGATGCAG
TACCGGCATG CGGATAAGCG GTAG
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| Protein sequence | MTSKPDLTTL VNRLPQPPHP LMGRRPGAVA LPDNIVCFQR RAASELNRPR RGRALHHRCV
LILALRTAVT VCVDDRVLRL GAGEGLIVLP FQFHHYLHPQ SESMLWLFVT FDLADTSQLA
SLRFKPFPLT PPVQGVATEF LAAYEQEGRE SDLPALLLAL LLARVRRLAR TPRRAPLEPE
ASPGVVMQVN QLAQKGPERS GIKQIAHTLG ISPSHLRARF RASCGVSIGR HLRRLRLEKA
CGLLRLTPNR VSEVAEQCGF NSIYHFSRAF RAAYGISPMQ YRHADKR
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