Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_0990 |
Symbol | |
ID | 6204809 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | - |
Start bp | 1216338 |
End bp | 1216820 |
Gene Length | 483 bp |
Protein Length | 160 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641690613 |
Product | hypothetical protein |
Protein accession | YP_001817878 |
Protein GI | 182412812 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.194287 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00737596 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGACCCGAT TCCTTACCGC ACTTCTGCTG TTCTTCGCCG CGGCGGCCGC GCTGACCGCG GCGTTTTCCG CCGGCGGCGT CGCCTTCACC AAGCGTTTTG AAACCGCGCT GCTGAGCGAG CCGAAGATGC TCGCCGCGCC CGTCACCAAG CTGCCTTACG CGCGCAAGCT CGCCATCCAG GAAGTGCAGG GCGCGTGGCT CCGCGTGAGC GAGGGCAAAA AGTCCGGCTG GGTCTTCGCC GGCAATGTCG CGGAGGAAAA ACCTTCCGAA ACTCGCGGGC TCGACGGGCT GCCGATCGCC GCGAGCGAAA CTTCGGCCTC GACCGCCGCG CGGCCGCTCA CACCCGCCTC GGAAGGTTAC TCCGAGCGGC ACGGACTCGC GAGCGCGGTC GAGGATTTCA ACTGGCTGCA GGAAGAGGGC GCAGTCAGCG ACGAAGACCT GCAGGCGTTT CTGCGCGAGC AGAAGAAAGG AGAGTTTCAA TGA
|
Protein sequence | MTRFLTALLL FFAAAAALTA AFSAGGVAFT KRFETALLSE PKMLAAPVTK LPYARKLAIQ EVQGAWLRVS EGKKSGWVFA GNVAEEKPSE TRGLDGLPIA ASETSASTAA RPLTPASEGY SERHGLASAV EDFNWLQEEG AVSDEDLQAF LREQKKGEFQ
|
| |