| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_0977 |
|---|
| Symbol | |
|---|
| ID | 6205868 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | - |
|---|
| Start bp | 1200035 |
|---|
| End bp | 1202833 |
|---|
| Gene Length | 2799 bp |
|---|
| Protein Length | 932 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641690600 |
|---|
| Product | peptidase M16 domain-containing protein |
|---|
| Protein accession | YP_001817865 |
|---|
| Protein GI | 182412799 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0612] Predicted Zn-dependent peptidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0362569 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGGTGGA TTTTTTGGTG GGCACTGGGC TGCGCGGCGT TGAGCGCGCA CGGCCAGCCG
CGGCCGTGGC CGCACGAGGT CAGCGATCTG CCGGTGAACC CCGCGGTCAC GTGGGGGCGG
TTGGACAACG GCGTGCGCTA CGCCGTCGCA CCCAACGCCG AGCCGGCCGA ACGCGTGAGC
CTGCGGCTGC TGGTCCTCGC CGGCAGCATG CACGAGAACG AGCGGCAGCG CGGCTACGCG
CACTTCGTCG AACACCTCGC CTTCGACGGC ACACGCCTTT ATCCCGGGCA GACGCTGCAT
GCGACGCTGC AGCAAACCGG ACTTGCGCGC GGACCGGACG TCAACGCGCA CACCCACACC
GATCGCACGA TCTACCGGCT CGATCTGCCG CAGCCCACGC CCGAACGGTT GCGGCTGGGG
CTCGGCGTGC TGCGCGAGTT CGCGGACGGC ATGATGCTCG ACCCCGCCGA GGTGGCGCGC
GAGAGCAACG TGATCCTGAT CGAGAAACGC GCGCGCGACA GTCACTCGCA GCGCGCGCAC
GCGGCGTTCA TGCGTTTCCT GTTTCCCGCC GGCCCACTCA CCGACCCGTC GGCCTTTGGT
ACCGAGGAAA GCATTCGCAC CGCGACCGCC GCGGAACTGC GGCGATTCTA TGAAACATGG
TATCGGCCGG AGAACCTCGT CGTCGTCGCG GTCGGGGCGA TCGAGCCCGC CGCCGTCGCC
CGCGAGATCG CCACTGCGTT TGGGAGCCTG CCCGCGCGCG CCGAGGCCGC GCCGGTTGTG
AACCTCGGCC CACTGACAAA TCCCGACGCG CTCGTGGTCG GCGTCGAGCC CTCCACCGAC
GCGGCCGGAG CCGCAAGCTT CCTGCTCGCG TCGATCGCGC CGGTGCTGCC GGTGGACACG
CGCGCCAGCG TGCAGGAAAT GCTGCTGCGC ACGATGGCGT TTGATGCGTT GAACCGCCGG
CTGGATCTCC TCCAGCGCCG TGAGTCAGCC CTGCTGCTCC ACGCCAGCGC CAGCTACAGC
AGCGGTCCGG TGTTTCAACA GGCGCTGCTC AGGATCGACA CGAGCCCGCG CGAGTGGCGC
GCGGCCGTCG AGCGGCTCGA GCAGGAGCGG CGCCGGGCGC TGCTGCATGG CTTCACGCCG
GCGGAGATCG AACTGTCCCG CGAACGCGCC CGCGCGCTTT TGCAGCACGC GGCGACCGCG
GAACGCACGC TCCTTTCCGA ACCGTATGCC GACGCGTTGG CGGAGAGCAT CGCTGCTCAT
CGGGTGTTTC TGGCCGGGGT CGAGCTCGAG CAGATCGCAC TCTCGGCGGT CGAGCGTGCC
ACGCCGGAAG AATGCCTGGA GGTGTTCCGC CACGCGTGGG GTCCGGGACA TCCGCGGTTG
TTCGCCTCCG GCCCGTTCAC GCTCGCGCGG CCGGCCGAGC AATTCGCCGC CGTGTTTCGC
CGCAGTGCGC AGACCCCGGT GAAGGCTCCG CGGCCGGCCG CGCCCGTGCA CTTCGCTTAC
ACCGATTTCG GCCGGCCGGG CAAAATCGTC GCCCGCGATC ACGTCGGCGA CCTCGACCTT
CACCGGATCC GGTTCGCCAA CGGCGTCCGC TTGAACCTGA AGTCGACGCC GTTCGAAGCG
GGGCGGATCG TCTACGGCGG CCGATTCGGC ACCGGTGCCG CCGGCGAGCC GGGCCGGCTG
CCCGGCCTGC GCGCATTCGT CGAACACGGC GTGACCGTTT TCGGACTCGG TCGCCATGAC
CAGCACGCTC TGCGGCAACT CGCCGCGGGC CAGCTGTCGT CGCTGTCGAT CACGACCGGC
GAAGAGGCCT TCTACATCGC CGGAGTCAGC GATCGCGCGG GCGCGGAGCG ATTGCTGCAG
CTCTTGGCGG CCCAGTTCAC CGATCCGGGT TGGCGGGCCA GTGATCTCCC GGTCGTGCAG
CAGCGGATCG TGGCGCAACT CGACGAAACC CTCCGGAACG CGGGCAACTA TCTCACGGCT
CGCCGGCAGG AACTGCTGAC CGGCGGCGAT TCACGCTACC GGCTGCCGCG GCCGGGCGAG
GTCCTGCGCT ATACGGTGCG GGACTTCCGC CGCTGGTTCG AACCGCAGCT GCAACACGCG
CCGCTCGAGA TCGGGATCGT CGGCGATTTC GACGTGGAGG CGATGGTGCA GCTGGCGAGT
CGGACGCTCG GCTGTTTGCC GCGCCGCGAA CCCGGCCCGG TGCCGCGGCC GGTGCGCTTC
CTCCCGCAGC TACCGCCCAC CCATGAAACG ATCCCCGCCA CCGTGCGACA GGCCGCCGTT
CAGCTGGCGT GGAGCGTGCC TGCGCCGCGC GGCGTGCGCG TCGAACACCA CCTCGAATTG
CTCGCCGACG TGCTCCGCAA TCGACTCATG CAGGAGATCC GGGGCGAACT CGGCGCGACC
TACGCCGCCA GTTGCCAGCT CTGGCGGAGC GATGTGCGGC GTGACACCGG CTATCTGATC
GCCGCGTTGG TCTGCGAGCC GGCGGATGTG GCGCGGATCG CAGAGACCAC GCGCCGGATC
GCCGACCGAC TGGCCCGTGA CGGCGCCACG GCCGAGGAGT TCGAGCGCGC GCGCCAGCCG
CGGTTGCTGG ATGCACCGGT GCAGCTCCGC AGCAACGGCT ACTGGCTCGG GATGGCCGTG
GCTGCGGCCC AGAGCCAAAC CGAGGAACTC GAGCGGCCGC GCCAGCGCGT GCTTGATCTC
GAACAGGCGA CTGCGAGCGA TATCAGCGCG CTCGCCGCTG AAGTATTACC GGCTGAGCGC
GCCTCGGTGT TCACCGCGGC GCCGGAGAAA ACACCCTGA
|
|---|
| Protein sequence | MRWIFWWALG CAALSAHGQP RPWPHEVSDL PVNPAVTWGR LDNGVRYAVA PNAEPAERVS
LRLLVLAGSM HENERQRGYA HFVEHLAFDG TRLYPGQTLH ATLQQTGLAR GPDVNAHTHT
DRTIYRLDLP QPTPERLRLG LGVLREFADG MMLDPAEVAR ESNVILIEKR ARDSHSQRAH
AAFMRFLFPA GPLTDPSAFG TEESIRTATA AELRRFYETW YRPENLVVVA VGAIEPAAVA
REIATAFGSL PARAEAAPVV NLGPLTNPDA LVVGVEPSTD AAGAASFLLA SIAPVLPVDT
RASVQEMLLR TMAFDALNRR LDLLQRRESA LLLHASASYS SGPVFQQALL RIDTSPREWR
AAVERLEQER RRALLHGFTP AEIELSRERA RALLQHAATA ERTLLSEPYA DALAESIAAH
RVFLAGVELE QIALSAVERA TPEECLEVFR HAWGPGHPRL FASGPFTLAR PAEQFAAVFR
RSAQTPVKAP RPAAPVHFAY TDFGRPGKIV ARDHVGDLDL HRIRFANGVR LNLKSTPFEA
GRIVYGGRFG TGAAGEPGRL PGLRAFVEHG VTVFGLGRHD QHALRQLAAG QLSSLSITTG
EEAFYIAGVS DRAGAERLLQ LLAAQFTDPG WRASDLPVVQ QRIVAQLDET LRNAGNYLTA
RRQELLTGGD SRYRLPRPGE VLRYTVRDFR RWFEPQLQHA PLEIGIVGDF DVEAMVQLAS
RTLGCLPRRE PGPVPRPVRF LPQLPPTHET IPATVRQAAV QLAWSVPAPR GVRVEHHLEL
LADVLRNRLM QEIRGELGAT YAASCQLWRS DVRRDTGYLI AALVCEPADV ARIAETTRRI
ADRLARDGAT AEEFERARQP RLLDAPVQLR SNGYWLGMAV AAAQSQTEEL ERPRQRVLDL
EQATASDISA LAAEVLPAER ASVFTAAPEK TP
|
|---|
| |