| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_0972 |
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| Symbol | |
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| ID | 6207373 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 1190964 |
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| End bp | 1194461 |
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| Gene Length | 3498 bp |
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| Protein Length | 1165 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641690595 |
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| Product | pyruvate carboxylase |
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| Protein accession | YP_001817860 |
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| Protein GI | 182412794 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1038] Pyruvate carboxylase |
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| TIGRFAM ID | [TIGR01235] pyruvate carboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0428493 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGCGA ACCGCAGCGA GATTGCCGTG CGCATCTTCC GCGCCGGCAC CGAACTCGGG
CTCCGCACGG TCGCGGTCTT TGCCCAGGAG GATCGGTTCT GCATCCATCG CTACAAGGCC
GACGAGGCGT ATCAGATCGG TGACGGCAAG GGTCCGGTTG CGGCGTATCT GGACATCGAG
AGCATCATCG ACGTCGCGAA GCGCCGCGGC GTGGACGCCA TTCACCCGGG TTACGGCTTC
CTCTCGGAGA ACGCCGAGCT CGCCCGCGCG TGCGAGCGGG CGGGCCTGAT CTTCGTCGGA
CCGCGGCCCG AACTGCTCGA CATGATGGGC GACAAGACCG CGGCTCGCGC GCTCGCCCAG
CGGATCGGCG TGCCGGTGCT GCCGGGCACG GAGGAGCCGC TGACCGATCG CGACGAGGCG
TTGCGCGTCG CGAAATCGAT CGGATTCCCG TTGATCATCA AGGCGGCCTT CGGCGGCGGC
GGTCGCGGCA TGCGGATCGT GCACAAGCCG GCCGACATGG CCGGGCTGCT CGACGAAGCG
CAGGCGGAGG CCGGCCGCGC GTTCGGCAAT CCGGCGGTTT TTCTGGAGAA ATACATCCCG
CGCGCGAAGC ACATCGAGGT GCAGGTACTC GGCGACCGGC ACGGCAACGT GATCCATCTC
CACGAGCGCG ATTGCTCCGT GCAGCGCCGG CACCAGAAGG TCGTCGAAGT GGCGCCGAGC
TACGGGCTGC CGGAGACGAT CGTCGCCGAG CTCTGCGAAG CGGCGGCCAA GCTCGCGCGT
TCCATTCGCT ACGACAACGC GGGCACGATC GAATTTCTCT ACGATCTCGA CCGGCACGAG
TGGTTCTTCA TCGAGATGAA CCCGCGCATC CAGGTCGAGC ATACCATCAC CGAGGTGATC
ACTGGCCTTG ATCTGGTGCG CGCGCAGATC CTGATCGCGC AGGGCCACGC CTTGCACTCG
CGCGAGGTGG GCATGCCACC GCAATCCGCC GTGCCGCGGC TGGGCTATGC GATCCAGAGC
CGGATCACCA CCGAGGATCC GGCGAACAAG TTCATTCCCG ACTACGGGCG AATCATGGTG
TACCGCTCGC CCGGAGGCTT CGGCGTGCGG CTCGACGGCG GCATGGGCTT CGCCGGCGCG
GTGATCACGC CGTTCTACGA CTCGCTGCTC GTGAAGTGCA TCACCAGCGG CGACACCTAC
GAGAGCGCGA TCCATCGCGC ACGTCGCGCG TTGGCGGAGT TCCGGATCCG CGGCGTCAAA
ACCAACATTC CTTTTATCGA AAACGTCATC GCGCACCCGC TGTTCCAGAG CGGCCAGGCG
ACGACGATGC TGATCGACAC CTCGCCCGAA TTGCTGTCCT TCCGGCCGCG CCGCGACCGC
GCGACCAAGC TGCTGAATTT TCTGGGCAAC GTCATCGTCA ACGGCAATCC ACACGCGAAG
GGCTACAAGC CCGGAAAGTC ACTCCTGCCG GCCGTGCCGC CCGCGGGCGG TCGCGGCGAA
CCGCCGCGCG GCACGCGCCA GCTGCTGCTT GAGCTCGGCC CGAAAAAATT TGCGGAGTGG
ACGCTCAAGC AGAAGCGGCT GCTGATCACC GACACCACGC TGCGCGACGC GCATCAATCG
TTGATGGCCA CGCGCGTGCG CACCTACGAC ATGCGCGCGG TGGCCGACGC CCTGGCGCAT
CACGCACCGG GGCTGTTCTC GCTGGAGATG TGGGGCGGCG CGACCTTCGA CACCGCGATG
CGCTTCCTCT ACGAGGACCC GTGGGACCGG CTGCGGCAGC TGCGCGCGGC GGTGCCTAAC
ATCTGTTTCC AGATGCTGCT ACGCGGCGCG AACGCGGTGG GCTATACGAA CTATCCAGAC
CACGTGGTCG CCGGGTTCGT CCGTCACGCC GCGTCGGCGG GCATGGATAT TTTCCGAATC
TTCGACTCGC TGAACTATCT GCCGAACCTG CGCGTCGCCA TGGAGGCGGT GCAGGATACG
CACGCGGTCT GCGAGGCGGC GATCTGCTAC ACCGGCGACA TCCTCGACGG GAAACGCGAT
AAGTTCAGCC TGCAGTATTA CGTGAAACTT GCCCGTGAGC TGGAGCGGAT GGGCGCGCAT
TTCCTCGCGA TCAAGGACAT GGCCGGACTC TGCCGACCCT ACGCTGCCTA CAAGCTGGTG
AAGGCGCTGC GGGAGGAGAT CGGGCTGCCG ATCCATTTCC ATACGCACGA CACCAGCGGG
ATCGCCGCGA CATCGGTGCT GCGGGCGAGC GACGCGGGCG TTGACGTGGT CGACCTCGCG
ATCGCCTCGA TGAGCGGCAG CACGTCGCAG CCGAACCTGA ACTCGATCGT CGCCGCACTG
CAGCATACGC CGCGCGATCC ACAGCTCGAT CTGGAACGGT TGAATGCGGT CTCCGATTAC
TGGGAACACG TGCGTGAGTT CTACCGGCCG TTCGACACCG CGCCCAAGAC CGGCTCGGCG
GAGGTTTACC TGCACGAGAT GCCGGGCGGG CAGTATACGA ACCTCAAGGA GCAAGCTGCG
TCGATGGGGG TGTCGCACCG CTGGCCCGAA ATCGCGCGCA CCTACGCGGA GGTGAACCAG
CTGTTTGGCG ACATCGTGAA GGTCACGCCT TCCTCGAAAG TCGTGGGCGA TCTCGCGCTG
TTCCTCTTTT CGCGCGGCAT CCGACCGGCG GATGTCGTCA ACCTGCCGCC CGGTACCACG
CCTTATCCGG AGAGCGTGAT CGACATGCTG ATGGGCGGAC TCGGTTGGCC GGAGGGCGGC
TGGCCCGAAG CCGTATGGCG TGCGATCCTC GGCGAGGCGC GCTTCAAGGA GGCGAAGGCA
AAATACACGG CCGCGACCCG CGCGACTAAG TCCAGAGCCA AGAGTCCAGA GTCCAGAGCG
GGCCACAAGC TCTCAGCTCC AGACTCTCAG CTCTCAGCTT TGCGCGACGA ACTCGCCGAG
AAACTTCGGC ACCAGCCGAG CGACGACGAG TTGTTCTCAC ACCTGATGTA TCCGCAGGTG
TTTGCCGATT TCGCCAAACA CGAGCGCGAG TTCGGCGACG TGAGCGTGCT GCCGACGCCC
GCGTTCTTCT ACGGGTTGCA GCCCGCGGAG GAAATCTCGG TCGAGATCGA GGAAGGCAAG
GTGCTGATCA TCCGGCTCGT ATCGGTCGGC GCGCCGGACA AGGACGGTCG CCGCACCATT
GCTTACGAGC TCAACGGCAT CTCGCGCGAA GCGCTGATCG TCGACCGCAG CGTCGCGCCG
AAGGCGAAGC CGCGGCTCAA GGCCGACCTC GCGAATCCGC TGCAGGTCGC CGCGCCGATT
CCCGGACTCG TCGTGGTGCT GAACGTGTCG GTCGGCACAA AAGTCACGAA GGGCGACAAG
CTCTTCATGA TGGAAGCGAT GAAAATGCAG ACCACGGTGT ACGCGCAGGC GGATGGCGTC
GTGGCCGAGT TGCACGCCGC CGTCGGCGAC ACCGTCGAAG CGAAGGACCT CGTCGTTACC
CTGCGCGACG GCGAATAG
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| Protein sequence | MAANRSEIAV RIFRAGTELG LRTVAVFAQE DRFCIHRYKA DEAYQIGDGK GPVAAYLDIE
SIIDVAKRRG VDAIHPGYGF LSENAELARA CERAGLIFVG PRPELLDMMG DKTAARALAQ
RIGVPVLPGT EEPLTDRDEA LRVAKSIGFP LIIKAAFGGG GRGMRIVHKP ADMAGLLDEA
QAEAGRAFGN PAVFLEKYIP RAKHIEVQVL GDRHGNVIHL HERDCSVQRR HQKVVEVAPS
YGLPETIVAE LCEAAAKLAR SIRYDNAGTI EFLYDLDRHE WFFIEMNPRI QVEHTITEVI
TGLDLVRAQI LIAQGHALHS REVGMPPQSA VPRLGYAIQS RITTEDPANK FIPDYGRIMV
YRSPGGFGVR LDGGMGFAGA VITPFYDSLL VKCITSGDTY ESAIHRARRA LAEFRIRGVK
TNIPFIENVI AHPLFQSGQA TTMLIDTSPE LLSFRPRRDR ATKLLNFLGN VIVNGNPHAK
GYKPGKSLLP AVPPAGGRGE PPRGTRQLLL ELGPKKFAEW TLKQKRLLIT DTTLRDAHQS
LMATRVRTYD MRAVADALAH HAPGLFSLEM WGGATFDTAM RFLYEDPWDR LRQLRAAVPN
ICFQMLLRGA NAVGYTNYPD HVVAGFVRHA ASAGMDIFRI FDSLNYLPNL RVAMEAVQDT
HAVCEAAICY TGDILDGKRD KFSLQYYVKL ARELERMGAH FLAIKDMAGL CRPYAAYKLV
KALREEIGLP IHFHTHDTSG IAATSVLRAS DAGVDVVDLA IASMSGSTSQ PNLNSIVAAL
QHTPRDPQLD LERLNAVSDY WEHVREFYRP FDTAPKTGSA EVYLHEMPGG QYTNLKEQAA
SMGVSHRWPE IARTYAEVNQ LFGDIVKVTP SSKVVGDLAL FLFSRGIRPA DVVNLPPGTT
PYPESVIDML MGGLGWPEGG WPEAVWRAIL GEARFKEAKA KYTAATRATK SRAKSPESRA
GHKLSAPDSQ LSALRDELAE KLRHQPSDDE LFSHLMYPQV FADFAKHERE FGDVSVLPTP
AFFYGLQPAE EISVEIEEGK VLIIRLVSVG APDKDGRRTI AYELNGISRE ALIVDRSVAP
KAKPRLKADL ANPLQVAAPI PGLVVVLNVS VGTKVTKGDK LFMMEAMKMQ TTVYAQADGV
VAELHAAVGD TVEAKDLVVT LRDGE
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