| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_0963 |
|---|
| Symbol | |
|---|
| ID | 6208841 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | - |
|---|
| Start bp | 1180332 |
|---|
| End bp | 1181618 |
|---|
| Gene Length | 1287 bp |
|---|
| Protein Length | 428 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641690586 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_001817851 |
|---|
| Protein GI | 182412785 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.565393 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAACCCG CCGTCGCCTC TTCGCCGCAT CCCTGGCGCT GGATCCCCAC GCTCTATTTC
GCGCAGGGGA TTCCGTACGT GGCGGTGATG ACGCTGTCGG TGGTGCTCTA CAAAAACCTG
CACGTCTCCA ACGCTGACAT CGCGCTCTAC ACCAGCTGGC TCTACCTGCC GTGGGTCATC
AAGCCGCTCT GGTCGCCCGT GGTCGAACTC TACCGGACGA AGCGGTTCTG GATCGTCGCG
CTGCAACTGG CGATGGCCGC GGCGCTGGCG CTCGTCGCCC TGGTCCTGCC TGGCTCCTTC
TTTTTCGTCG GAACGCTCGC GGTTTTCTGG CTGCTCGCCT TCAGCTCGGC CACGCACGAC
ATCGCGGCGG ACGGATTTTA TCTGCTCGCG CTTGCTCCCC ACCAGCAGGC GGCGTTCGTC
GGCGTGCGCA GCACGTTCTA TCGACTCGCG ATGATCGCCG GCCAAGGCGG CCTCGTCTGG
CTGGCGGGCG TCTGGCAGGA TCGCACCGGG AATCCGGCGT TGGCGTGGTC CTGGGTCTTC
GCGCTCGCCG CGGGTTTCTT CGTGGTCGTG GCGATTCATC ATGGAGTGTT TCTGCCTCGG
CCGGAGCGCG CGACCACCGC GGCCACTCCC ACGCGCTCCT CGTTCGGCAC AGATTACCTC
GAGGTGTTCG CCGCTTTTTT CCGGAAAAAA GGAATCGTTC CTATCCTGGC ATTTCTGCTC
CTCTACCGGT TCGCCGAAGC GCAGCTGCTC AAGCTCGTGC CGCCGTTCCT GCTCGACGCG
CGCAGCGTCG GCGGCTTGGG ACTGAGCACG CAACACGTGG GATTGATCTA TGGCACAATC
GGCGTGATTG CGCTGACGGC GGGTGGACTC GTCGGCGGAG CGGTGATCGC GCGGTTCGGA
TTGAAGCGGC TGCTCTGGCC GATGCTGTTG TCGATGTATA CGCCGAATCT CGTGTTCATC
TTCCTCGCGC TCGCCCAGCC GACGAATCTC GCTGTCGTCG GCGGCGCGCT CGCGGTCGAG
CAGTTCGGCT ACGGGTTCGG GTTCACCGCC TACATGGTTT ACATGATGAT GGTCGCCGAC
GGGGAGCATC GGACGGCGCA CTACGCGCTC TGCACCGGCT TCATGGCGTT GGGCATGATG
CTGCCGGGGA TGGGCGCCGG GTGGCTGCAG GAAAAACTCG GCTACGTGAA TTTCTTTATC
TGGGTCTGCA TCGCGACGAT CCCGTCGTTC CTCGCGACGG CGGCGATCAA GGTCGATTCC
GCCTTCGGCC GAAAAACTTC GGCGTAG
|
|---|
| Protein sequence | MEPAVASSPH PWRWIPTLYF AQGIPYVAVM TLSVVLYKNL HVSNADIALY TSWLYLPWVI
KPLWSPVVEL YRTKRFWIVA LQLAMAAALA LVALVLPGSF FFVGTLAVFW LLAFSSATHD
IAADGFYLLA LAPHQQAAFV GVRSTFYRLA MIAGQGGLVW LAGVWQDRTG NPALAWSWVF
ALAAGFFVVV AIHHGVFLPR PERATTAATP TRSSFGTDYL EVFAAFFRKK GIVPILAFLL
LYRFAEAQLL KLVPPFLLDA RSVGGLGLST QHVGLIYGTI GVIALTAGGL VGGAVIARFG
LKRLLWPMLL SMYTPNLVFI FLALAQPTNL AVVGGALAVE QFGYGFGFTA YMVYMMMVAD
GEHRTAHYAL CTGFMALGMM LPGMGAGWLQ EKLGYVNFFI WVCIATIPSF LATAAIKVDS
AFGRKTSA
|
|---|
| |