| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_0960 |
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| Symbol | |
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| ID | 6205508 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 1176510 |
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| End bp | 1177874 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641690583 |
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| Product | two component, sigma54 specific, Fis family transcriptional regulator |
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| Protein accession | YP_001817848 |
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| Protein GI | 182412782 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATTTCC TCGTAGTCGA CGACGATCAG ATCTTCCGCG AAGCCACCTG CCTCTTGATC
GAGGAGGAGG GCCACTTCGC CGCGAGCGCG TCCAACGGCG ACGTGGCGCT GGAGCGCGTG
CGCGAGGACA AGTTCGACGC GGTGCTGCTC GACCTGCACC TCGGTCGGCA CAACGGACTC
ACGCTGATCC CGCAGCTGCT GAAGGTGCGG CCGAACCTGC CGATCGTGAT GTTCTCCGCG
CAGGGCACGG TGAAGACCGC CGTGCAGGCG CTGCACCAGG GCGCGGTGGA TTTTTTGGAG
AAGCCGTTTA CGCGCGATCA ATTTCACGCG GTGCTCGCCC GCTTGCGGCG GCTCAGCGAG
ATGGGCCAGA AGATCGAGCG GCTCGAGCAG GAGGTGAAGG AAGTCCAATC GCAGAGCCCG
GAGCCGCTGA TCGATTTCGA GACGCCGGTG ATGCGGGCGG TGATGGACGT GCTGCAGCGC
GCAGCCAAGA GCAACGCCTC GGTGCTGATT CTTGGGGAGA GCGGCACCGG CAAGAGCGTG
GCGGCCCGCG CGCTGCACGC GCAGAGTAAT CTGGCGGACA GGCCGTTCGT GACCGTGAGC
TGTCCCGCGC TCTCGAAGGA GTTGCTCGAA AGCCAGCTGT TCGGCCACGT GCGCGGGGCG
TTCACCGGGG CGATGCGCGA TCACTGGGGC AAGGTGAAGG CGGCCGAGGG TGGCACGCTG
TTCCTCGACG AAATCGGCGA CCTGCCGCTG GAGATTCAAC CCAAGCTGCT GCGGCTCCTG
CAGGAGAAGG AATACGAGCG GCTGGGGGAG ACGATCACGC GGCGTTCCGA CGTGCGCATC
GTCGCCGCCA CCAACCGTGA TTTGAAGAAG CGCGTGGCCG AGGGCGCGTT TCGCGAGGAT
CTCTATTACC GGCTCAACGT GATCACGGTC GAGATGCCGC CGCTGCGCGC GCGGCCGAAG
GACGTGCTGC GCTTCGCCGA GCATTACGTG CGGCATTGCG CGACCCAGTT TGGGCGAACC
GTCGATGGCT TGACGGACGA AGCGGCGGAA TGCATCCGCC GCTACAGCTG GCCGGGCAAC
CTCCGCGAAC TGCGCAACAC GATCGAGCGC GCGGTCATCC TGACGCACGA AAAGAAAATC
ACCGCCGCCG ATCTGCCGAT CGAGATTCGC CTGAACGAGT CGGCGCCCGG CGCGTTGCTC
GACGCCCCGC TGCAGACCGG CGCGATGGTT TCGCTGGCGA CCCTCGAGGA GCAGCACATT
CGCCGCGTGC TCGAGGTCAC GTCGAGCATG AATGAAGCGG CGGAGATTCT AGGCATCGAT
CAGGCCACGC TCTACCGAAA AAGGAAGAAG ATGGGGATCA AGTAG
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| Protein sequence | MDFLVVDDDQ IFREATCLLI EEEGHFAASA SNGDVALERV REDKFDAVLL DLHLGRHNGL
TLIPQLLKVR PNLPIVMFSA QGTVKTAVQA LHQGAVDFLE KPFTRDQFHA VLARLRRLSE
MGQKIERLEQ EVKEVQSQSP EPLIDFETPV MRAVMDVLQR AAKSNASVLI LGESGTGKSV
AARALHAQSN LADRPFVTVS CPALSKELLE SQLFGHVRGA FTGAMRDHWG KVKAAEGGTL
FLDEIGDLPL EIQPKLLRLL QEKEYERLGE TITRRSDVRI VAATNRDLKK RVAEGAFRED
LYYRLNVITV EMPPLRARPK DVLRFAEHYV RHCATQFGRT VDGLTDEAAE CIRRYSWPGN
LRELRNTIER AVILTHEKKI TAADLPIEIR LNESAPGALL DAPLQTGAMV SLATLEEQHI
RRVLEVTSSM NEAAEILGID QATLYRKRKK MGIK
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