Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_0946 |
Symbol | |
ID | 6207352 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | - |
Start bp | 1161936 |
End bp | 1163906 |
Gene Length | 1971 bp |
Protein Length | 656 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641690569 |
Product | multi-sensor signal transduction histidine kinase |
Protein accession | YP_001817834 |
Protein GI | 182412768 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATACGC AGCGCCCGCG CGCGCGCTCG TCGTTGCGGG AGCCCGGAAC GGTCGGACAG GGAAACCCTG AGGCGCGAGC GAGTTGTCAT GAAAGCCGCG AGGGCGAGTT GCCGAATGCT CCGGTCGTTA TTCGTTTGGC GCTCGCGCGT CCGGCTGGTC CCGAGCTGCG TCCCGCGGTG CATGTGAAGG TTTCGATACA AAGGAAAATT GCCGCCGGCT TTGCCGTGGC GGCCCTCCTG TTGGCGCTGA TCACCGGCGC GGCGCTGCGG AACGCATTTC GCTTCGATGA CACCTTCCGG TGGGTGGACC ATACCCATGC GGTGTTGCGG GAGGTCGAAC AGGTACTCGC GAATCTGCTG ATCGTGCAAA GCGCCGGCCG CGGTTTCGTC CTGAGCGGCA GCGAGGATGT CCTCGCCCCC TTGAACCAAA GCCGGGTCGA ACTGGCCGCA GCGATGGAGC AGCTGCGCAA GCTCACCGCC GACAACCCGA TCCAACAGGA GCGGTTGCGC GCACTGGCCC CCGTTACGGA ACGCGTCGTG CAGGCGATGG AGGAGCAACT GCAGCAACGC CGCGCCACCG CCACCGTGAT CGGAGGTGAA GCACCGGTGC TCCTGCGCAC CCAGGCAGAC GTGGATCGGG CGCGGGAGAT CATTCGCGCC ATTCGTTTTG AGGAGCAGCG GCTGCTGGCG GAACGCATGC GCGCCGCCCA GCGCACCGCT CACGGAACCG TCACGGCCTC AGTGGCCGCG ACGGTCGTGG CGCTGCTGTT CGTGCTGGCT TCGGTCTGGC TGGTGCGGCG GGATTTTGGC GAACGCGTGC GCTCCGAACA GGCGCTGCGG CAGAGCCAGC AGATGTTCAA GCGGCTTTTC GACAACGCGC CGGACGCCAC GGTTCAAGTC GACCAACAGG GTCGCATCGT ACGCGCCAAC CGCCAGATCG AGGCGCTCTT CGGCTGGGAG CGCGGCGAGT TGTCCGGCCG GCGCATCGAC GAACTGCTGC CGCCGCGGTT TGCCTCGCGG CATTCCGCCC ACCTCGCGGC CTATTTCGTC GCGCCGCGCA CCCGCCCCAT GGGCGTCGGC TTGGAGCTGT TTGGCCGGCG GCGCGATGGC TCGGAATTCC CGGTCGACAT CATGCTCAGT CCGCTCGAAA CCGAGCAGGG GATGCAGGCG CTCGCCGTCA TTCGCGACGT GACGGAGCGC AAGCGAATCG ATGAACAGAT CCGCCGTCTG AACCTCGATC TGCAGCTGCA GAACGCCCGG CTCGAGCTGG TGAACAACGA ACTCGAGGCG TTTTCCTATT CCGTTTCCCA CGACCTGCGC GCGCCGCTGC GCCACATCGA CGGGTTCGCC AGTCTGCTGG CCAAGCACGC CGCCGGCACC CTCGATGAGA AGGGCCAGCG CTTCATCACG ATCATCTCTG ACGCGGCGCG GCGTATGGGC CGGCTGATCG ACGACCTGCT GACTTTTTCC CGCATGGGCC GGGCCCAGCT CGAAACCATG ACGGTTGATC AGAACCAGCT GATCACGGAT GTGATTCGCG ACAACGAGCT GGATCGCGAT CAGCGCATCG AATGGCAGCT CGAGCCGCTC CCGGCCGTGC GGGCGGATCC GGCCATGTTG CGGCAGGTCT GGTTCAACCT GCTGGGCAAC GCGGTGAAAT ATTCGGCGCG CGCCGAACCG CCGCGGATCG AGGTCGGCTG GCGATCCGAC CCGGAGAATT CCGCCAGCCA GGTGTTCTTC GTCCGCGACA ACGGCGTCGG CTTCGACATG CGCTATGCCG CCAAGCTGTT CGGCGTCTTT CAGCGGTTGC ATGCCGAGTC CGAGTTCGAG GGCACCGGCA TCGGCCTCGC CAATGTGCGA CGCATCATCA TGCGTCACGG CGGCCGCGTG TGGGCCGAAA GCACCCCGGG CGCTGGCGCT ACCTTCTTCT TTTCCCTGCC GGTGAACGCC ACTTCCTCCA CGGGGTCCTG A
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Protein sequence | MDTQRPRARS SLREPGTVGQ GNPEARASCH ESREGELPNA PVVIRLALAR PAGPELRPAV HVKVSIQRKI AAGFAVAALL LALITGAALR NAFRFDDTFR WVDHTHAVLR EVEQVLANLL IVQSAGRGFV LSGSEDVLAP LNQSRVELAA AMEQLRKLTA DNPIQQERLR ALAPVTERVV QAMEEQLQQR RATATVIGGE APVLLRTQAD VDRAREIIRA IRFEEQRLLA ERMRAAQRTA HGTVTASVAA TVVALLFVLA SVWLVRRDFG ERVRSEQALR QSQQMFKRLF DNAPDATVQV DQQGRIVRAN RQIEALFGWE RGELSGRRID ELLPPRFASR HSAHLAAYFV APRTRPMGVG LELFGRRRDG SEFPVDIMLS PLETEQGMQA LAVIRDVTER KRIDEQIRRL NLDLQLQNAR LELVNNELEA FSYSVSHDLR APLRHIDGFA SLLAKHAAGT LDEKGQRFIT IISDAARRMG RLIDDLLTFS RMGRAQLETM TVDQNQLITD VIRDNELDRD QRIEWQLEPL PAVRADPAML RQVWFNLLGN AVKYSARAEP PRIEVGWRSD PENSASQVFF VRDNGVGFDM RYAAKLFGVF QRLHAESEFE GTGIGLANVR RIIMRHGGRV WAESTPGAGA TFFFSLPVNA TSSTGS
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