| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_0926 |
|---|
| Symbol | |
|---|
| ID | 6208483 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | - |
|---|
| Start bp | 1138154 |
|---|
| End bp | 1138612 |
|---|
| Gene Length | 459 bp |
|---|
| Protein Length | 152 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 641690549 |
|---|
| Product | heat shock protein Hsp20 |
|---|
| Protein accession | YP_001817814 |
|---|
| Protein GI | 182412748 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0071] Molecular chaperone (small heat shock protein) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGAATCG TTCGTTACAC GTATCCCAAC TACCGCTCAC TGGCCCCCGC CTGGGGCGCG
CTCTCCCGCT CGCCTTGGAC AGGGCTGGAA GGTGAGATCG ACCGCCTCTT CGAGACGGCC
CTGAGCGGCT TCAACGAGAC GTTCGGCCGC ACGGAATTCC CCGTCGATCT CTACGAGGAC
AAGGACAACA CCTATGTGCG CGCCGAGCTG CCCGGGCTTG AACGCGACGA CATCAACGTC
GAAATGGTCG AGGACTACCT CACCATCAGC GGCAAGCGGA AGACCGCCGA CGCCGACGGC
AAGGAGGAGG AGTCGTTCTC CTTCAGCCGC TCCGTCAACA TCCCGGAGGA AGTGCAGGCC
GACAAGGTCA ACGCTGCCTA CGAGAACGGC GTCCTCACCG TGACGCTGCC GAAGCGTGAA
GAGGCCAAGC CGCGGAAAAT CAGCGTCGCG GTGAAATGA
|
|---|
| Protein sequence | MRIVRYTYPN YRSLAPAWGA LSRSPWTGLE GEIDRLFETA LSGFNETFGR TEFPVDLYED
KDNTYVRAEL PGLERDDINV EMVEDYLTIS GKRKTADADG KEEESFSFSR SVNIPEEVQA
DKVNAAYENG VLTVTLPKRE EAKPRKISVA VK
|
|---|
| |