Gene Oter_0920 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_0920 
Symbol 
ID6208156 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp1131850 
End bp1132980 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content64% 
IMG OID641690543 
ProductABC-2 type transporter 
Protein accessionYP_001817808 
Protein GI182412742 
COG category[V] Defense mechanisms 
COG ID[COG0842] ABC-type multidrug transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.518017 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGGAAC GCATCCTCAC CATGCTCCGC AAGGAGTTTC GCTCGATCTT CCGCGATCCA 
CGGATGCGGA TGGTCATCTT CGGACTGCCC GTGATCCAGA CGCTGATTTT CGGCTACGCC
GTGACGCTGG ACGTCCGCAA CGTTCAGCTC GTGCTCGTCG ACCACGATCA AAGCACGGCG
AGCCGCGATT TCGCGGCGCG TTTCACCGGC TCGGGCTATT TCACGATCGT GCGGCACACG
CCCGATCTCG CGGCGGCGAG CGCCGCGATC GATGCCGCGC GTGCGTCGGC CATCCTGCAG
CTGAACGCCG GTTTCGGTGC CGATCTGCAC GCCGGGCGGA CGGCGGTGGC GCAGTTGATC
GTCGATGGCT CGGATTCAAA CACCGCGCAG TTCGTGCTCA ACTACGCCGG CGTCATCGCG
CGCACCTTCG ACCAGGAGGT GCTGCTGGCG GCCGCGGAAC GGCGCACCGG CCGGACGACG
TCCGTGGGCC GGGTCGAACT CCGGCCGCGC GCCTGGTTCA ACGCTGATCT CGAGAGCCGC
GATTTCTACG TCCCCGGAAT CATCGCGACG CTGGTCATGC TCGTCGGCCT CATGCTGACC
AGCATGGCGA TCGTCCGCGA AAAGGAGGTC GGCACGATCG AGCAGATCAT GGTCACGCCG
ATTCGGCCGG TGGAATTCAT CCTCGGCAAA TGCGCACCGT TCGCGGTGAT CGGCTACATC
AATGTCGTCA TGGTAGTCCT GGTGGGCCTG TTCTGGTTCG GGATCCCGAT GCGCGGCAGT
TTTCTGCTCC TGCTGCTCGG CACGACGCTC TTCCTGCTCA GCACGCTCGG CATTGGACTG
TTCATTTCGA CGGTGAGCGG CACGCAGCAG CAGGCGATGA TGACGACGTT CTTCTTCTTC
TTTCCGGCGA TGCTGCTCTC CGGCTTCGTG TATCCGATCG CCAATATGCC GGAGGTGGTG
CAGTGGCTGA CGTTCCTGGA CCCGCTGCGC TATTTCCTGG TGATCATTCG CGGCATCTTC
CTCAAGGGCG TCGGGCTCGA AATCCTCTGG CCGCAGCTGC TCGGGTTGCT CGTGCTCGGC
GTGGTGGTGC TGGGTTTCGC CGTCAGCCGC TTCAAGAAGA CGCTCGCGTG A
 
Protein sequence
MWERILTMLR KEFRSIFRDP RMRMVIFGLP VIQTLIFGYA VTLDVRNVQL VLVDHDQSTA 
SRDFAARFTG SGYFTIVRHT PDLAAASAAI DAARASAILQ LNAGFGADLH AGRTAVAQLI
VDGSDSNTAQ FVLNYAGVIA RTFDQEVLLA AAERRTGRTT SVGRVELRPR AWFNADLESR
DFYVPGIIAT LVMLVGLMLT SMAIVREKEV GTIEQIMVTP IRPVEFILGK CAPFAVIGYI
NVVMVVLVGL FWFGIPMRGS FLLLLLGTTL FLLSTLGIGL FISTVSGTQQ QAMMTTFFFF
FPAMLLSGFV YPIANMPEVV QWLTFLDPLR YFLVIIRGIF LKGVGLEILW PQLLGLLVLG
VVVLGFAVSR FKKTLA