Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_0920 |
Symbol | |
ID | 6208156 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | + |
Start bp | 1131850 |
End bp | 1132980 |
Gene Length | 1131 bp |
Protein Length | 376 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641690543 |
Product | ABC-2 type transporter |
Protein accession | YP_001817808 |
Protein GI | 182412742 |
COG category | [V] Defense mechanisms |
COG ID | [COG0842] ABC-type multidrug transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.518017 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGGGAAC GCATCCTCAC CATGCTCCGC AAGGAGTTTC GCTCGATCTT CCGCGATCCA CGGATGCGGA TGGTCATCTT CGGACTGCCC GTGATCCAGA CGCTGATTTT CGGCTACGCC GTGACGCTGG ACGTCCGCAA CGTTCAGCTC GTGCTCGTCG ACCACGATCA AAGCACGGCG AGCCGCGATT TCGCGGCGCG TTTCACCGGC TCGGGCTATT TCACGATCGT GCGGCACACG CCCGATCTCG CGGCGGCGAG CGCCGCGATC GATGCCGCGC GTGCGTCGGC CATCCTGCAG CTGAACGCCG GTTTCGGTGC CGATCTGCAC GCCGGGCGGA CGGCGGTGGC GCAGTTGATC GTCGATGGCT CGGATTCAAA CACCGCGCAG TTCGTGCTCA ACTACGCCGG CGTCATCGCG CGCACCTTCG ACCAGGAGGT GCTGCTGGCG GCCGCGGAAC GGCGCACCGG CCGGACGACG TCCGTGGGCC GGGTCGAACT CCGGCCGCGC GCCTGGTTCA ACGCTGATCT CGAGAGCCGC GATTTCTACG TCCCCGGAAT CATCGCGACG CTGGTCATGC TCGTCGGCCT CATGCTGACC AGCATGGCGA TCGTCCGCGA AAAGGAGGTC GGCACGATCG AGCAGATCAT GGTCACGCCG ATTCGGCCGG TGGAATTCAT CCTCGGCAAA TGCGCACCGT TCGCGGTGAT CGGCTACATC AATGTCGTCA TGGTAGTCCT GGTGGGCCTG TTCTGGTTCG GGATCCCGAT GCGCGGCAGT TTTCTGCTCC TGCTGCTCGG CACGACGCTC TTCCTGCTCA GCACGCTCGG CATTGGACTG TTCATTTCGA CGGTGAGCGG CACGCAGCAG CAGGCGATGA TGACGACGTT CTTCTTCTTC TTTCCGGCGA TGCTGCTCTC CGGCTTCGTG TATCCGATCG CCAATATGCC GGAGGTGGTG CAGTGGCTGA CGTTCCTGGA CCCGCTGCGC TATTTCCTGG TGATCATTCG CGGCATCTTC CTCAAGGGCG TCGGGCTCGA AATCCTCTGG CCGCAGCTGC TCGGGTTGCT CGTGCTCGGC GTGGTGGTGC TGGGTTTCGC CGTCAGCCGC TTCAAGAAGA CGCTCGCGTG A
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Protein sequence | MWERILTMLR KEFRSIFRDP RMRMVIFGLP VIQTLIFGYA VTLDVRNVQL VLVDHDQSTA SRDFAARFTG SGYFTIVRHT PDLAAASAAI DAARASAILQ LNAGFGADLH AGRTAVAQLI VDGSDSNTAQ FVLNYAGVIA RTFDQEVLLA AAERRTGRTT SVGRVELRPR AWFNADLESR DFYVPGIIAT LVMLVGLMLT SMAIVREKEV GTIEQIMVTP IRPVEFILGK CAPFAVIGYI NVVMVVLVGL FWFGIPMRGS FLLLLLGTTL FLLSTLGIGL FISTVSGTQQ QAMMTTFFFF FPAMLLSGFV YPIANMPEVV QWLTFLDPLR YFLVIIRGIF LKGVGLEILW PQLLGLLVLG VVVLGFAVSR FKKTLA
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