| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_0897 |
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| Symbol | |
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| ID | 6208208 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 1105270 |
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| End bp | 1107507 |
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| Gene Length | 2238 bp |
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| Protein Length | 745 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641690520 |
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| Product | thiol:disulfide interchange protein DsbD, putative |
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| Protein accession | YP_001817785 |
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| Protein GI | 182412719 |
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| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4232] Thiol:disulfide interchange protein
[COG4233] Uncharacterized protein predicted to be involved in C-type cytochrome biogenesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.588085 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCCCGC ACATGTCCGC GTTCTGTTCG TTCGCTCCGA ACTGGTTGAG GTTGCGCCTG
CTTGTCGGGC TCATCGCCCT CGGCTGGCTG CAAACGGCGA CGGCGGCGCT GCCGTCGCCC
GAAACCCACG TGCAGGGGTC CTTGGTTTCC GCCGACGCTT CCATCCAGCC GGGCCGGCCG
TTCACGGTGG CACTGCGGCT CGAGCACGAA CCACACTGGC ACACCTACTG GCTCAATCCG
GGCACGGGCC TCGCCACGAC GCTCGCCTGG AAACTGCCGG CCGGGTTCAC CGCCGGCGAC
ATCCAATGGC CGGCGCCGAT CGTCCTCAAG GATCGCAGCG GCACAGTCGT GGGCAACGGC
TACGAGGGCG AAACCCTGCT GCTGGTCACG ATCACTCCGC CCGCCACGCT CGCCACCGGC
ACCGAGGTCC GGCTCGAAGC CGACGCGGAG TGGCTGATGT GCAGCGATGT CTGCATCCCG
GGAGGCCAGG CTCTCTCACT CACGCTGCCC GTGCGCGGCG ATCCGCCGTC ACCGAATCCC
CCTTGGCACG AAAAAATCGC CGCGACGGCC GCCGGACTAC CGCGTCCGCC CGAACAATGG
AAAGTCACCG CGAGCCGGGA CGAGAAGAAC ATCACGCTCC ACATCACGCC CACGGCGGAC
CGCCCCACAC AAGTGCCGGA GCAGCTGCAT TTCTTTGCGG ATGACAACCT CGTGGCCTAT
GAACTGCCGC AGACCACGCA GCCCGCTGGA ACGGCAGGCT CCGCCCGGGT CGGTTTCATC
CTGACCGCGC CGGTTTCGCC GGACGGACCC CAGAACGCCA CGGAACTTCG CGGCGTGCTC
ACGTCGGAAA ACGGCTGGCG CGCCGACGGC TCGATGCGCG GGCTGCGCAT CGACGTGCCC
CTCACGGTCG CGAGCACCGC ACCCGGCGCG AGCCTCAGCA CGGCGGAGCG CGGAGCTCCG
ACCCCGGGCA GCACCGCGGC CGCCGTGACG CCCGCGAACT CCGGGTTGTT GGCGACGCTG
CTGCTGGCGT TTGTCGGTGG GCTGATCCTC AACCTCATGC CCTGCGTGTT CCCGGTGTTG
GGCATCAAGA TTCTCGGGTT CGTCAACCAA GCCGGCCACG CGCGCAGCAA GGTCGTGGCC
CACGGACTCG TGTTCACGCT CGGCGTGCTG TTGTCCTTTT GGGTGCTCGC GGGCGCGCTG
GCGATTCTGC GCGCCGGCGG CGATCAGCTC GGCTGGGGTT TCCAGCTGCA ATCGCCCGCC
TTCGTCTTTT CGCTCACGGT GCTGTTGCTC GTGTTCGCGA TGAACATGAG CGGCGTGTTC
GAGTTTGGCC TGCGCGCCAC GAGCGTCGGC GGCGAACTGC AGACAAAATC CGGCCTCGCC
GGCTCGTTTT TCACCGGCGT GCTCGCCACC GTGGTGGCGA CCCCTTGCTC AGCGCCGTTT
CTCGCGCCTG CGCTCGGTGC GGCACTGGCG CTTTCCACGA TCGAATCGTT CACGATCTTC
ACCGCCATCG CGCTCGGGCT CGCCACACCC TATCTGCTGC TCTCGATTTT TCCCGGCGCG
GTTAAAATCC TGCCGCGACC GGGCGCGTGG ATGGAGGGCT TCAAGCAGTT CATGGCGTTT
CCACTTTACG CCACCGTTGC GTACCTCGTG TGGGTGCTGG CCGGCCAGGT GAGTGAAGAA
GGTTTCCAGC AGGTGCTTTT CGGCCTCGTG CTCGTTGCGC TGGGCGTGTG GATCTACGGT
CGTTGGAGCA TGCCGGGCGC GTCGCCCGCG CGGGTCCGCT CCGGCGCCAC CGCGCTGGTC
CTGGTGGCCG CCCTCGGATT GTGGCTGGGC TGGCCCCAAG CCACGCTGAC GCAGACTCCC
GGGAGCGTGA CTTCGGCCGG CGTCGCCTGG CAGCCGTGGA GCCCGGAGGC GGTGCAGCAA
CTCCGCGCTG AAGGCCGAAT CGTCTACGTG GACTTCACCG CGCGCTGGTG CGCGACATGC
CAGACCAACA AGAAACTCGT CTTCCACTCT GACGAGGTGC TGCAAACGTT CGCGCACAAG
AAAGTCGCCG CGCTCCGCGC CGATTGGACC AACAAGGATC CGCGGATCAC CGCCGAACTC
GCGCGCTACG GTCGCAGCGC CGTGCCGTTT AACGTGATCT GGCTCCCCGG TCGCAATGAG
CCGGTGATCC TGCCGGAGAT CCTCACGCCC GGGACCGTGC TGGAGGCGCT CCAGAGTGAG
ACCGTCGCGG TGCAGTAG
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| Protein sequence | MVPHMSAFCS FAPNWLRLRL LVGLIALGWL QTATAALPSP ETHVQGSLVS ADASIQPGRP
FTVALRLEHE PHWHTYWLNP GTGLATTLAW KLPAGFTAGD IQWPAPIVLK DRSGTVVGNG
YEGETLLLVT ITPPATLATG TEVRLEADAE WLMCSDVCIP GGQALSLTLP VRGDPPSPNP
PWHEKIAATA AGLPRPPEQW KVTASRDEKN ITLHITPTAD RPTQVPEQLH FFADDNLVAY
ELPQTTQPAG TAGSARVGFI LTAPVSPDGP QNATELRGVL TSENGWRADG SMRGLRIDVP
LTVASTAPGA SLSTAERGAP TPGSTAAAVT PANSGLLATL LLAFVGGLIL NLMPCVFPVL
GIKILGFVNQ AGHARSKVVA HGLVFTLGVL LSFWVLAGAL AILRAGGDQL GWGFQLQSPA
FVFSLTVLLL VFAMNMSGVF EFGLRATSVG GELQTKSGLA GSFFTGVLAT VVATPCSAPF
LAPALGAALA LSTIESFTIF TAIALGLATP YLLLSIFPGA VKILPRPGAW MEGFKQFMAF
PLYATVAYLV WVLAGQVSEE GFQQVLFGLV LVALGVWIYG RWSMPGASPA RVRSGATALV
LVAALGLWLG WPQATLTQTP GSVTSAGVAW QPWSPEAVQQ LRAEGRIVYV DFTARWCATC
QTNKKLVFHS DEVLQTFAHK KVAALRADWT NKDPRITAEL ARYGRSAVPF NVIWLPGRNE
PVILPEILTP GTVLEALQSE TVAVQ
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