| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_0895 |
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| Symbol | |
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| ID | 6208213 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 1102667 |
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| End bp | 1104052 |
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| Gene Length | 1386 bp |
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| Protein Length | 461 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641690518 |
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| Product | glutamate synthase, NADH/NADPH, small subunit |
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| Protein accession | YP_001817783 |
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| Protein GI | 182412717 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
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| TIGRFAM ID | [TIGR01317] glutamate synthases, NADH/NADPH, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.426068 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.302268 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGGAGA AAAAACTCCG GACGCAGGGC GCGCGCTGCA TGGACTGCGG CGTACCATTT
TGCCACACAG GCAAGCTGAT CAGCGGCATG GCCTCGGGCT GCCCGATCAA CAACCTCATC
CCGGAATGGA ACGATCTCGT TTACCGCGGC CTCTGGAAAG AGGCGCTCGA TCGTCTCCAC
AAGACGAATA ACTTCCCCGA CTTCACCGGC CGCGTCTGCC CGGCGCCGTG CGAAGGCTCG
TGCGTGCTCG GCATCAACAA TCCCCCGGTC ACGATCAAGA ATATCGAATA TAGCATCATC
GAGCGCGGTT GGGAGGAAGG CTGGGTGCTG CCCGAGCCGC CGAAGGTGCG CACCGGAAAG
AAAGTGGCCG TGATCGGCTC GGGCCCCGCG GGCCTCTCGG CCGCCGCGCA GCTCAACAAG
GCCGGCCACA CCGTGACGGT GTTCGAACGG GCCGATCGTC CCGGCGGGTT GCTGATGTAT
GGCATCCCGA ACATGAAGCT CGACAAGAAG GAGGTCGTGT TGCGCCGCGT GAAGCTGATG
GAGCAGGAAG GCGTGAAGTT CATCTGCAAC GCGAACGTCG GCGAAAATGT CGAGCCGCAG
ATTTTCCTGA AGGAGTACGA CGCCACGGTG ATCTGCACCG GCGCCACGCA GCCGCGCGAT
CTGCCGATCG AAGGCCGCAA CCTCAAGGGC GTCCACTTCG CGATGGAGTT CCTCACCGCG
AACACCCAGG CGCTGCTCAA CGGCGGCGCC GAGCACAGCC CGATCCAGGC CAAGGGCAAG
GACGTGATCG TCATCGGCGG CGGTGACACC GGCACGGACT GTGTTGGCAC GTCGATGCGC
CACGGCGCCA AAAGCATCAC GCAAATCGAG ATTTTGCCGA AGCCACCGAT GGATCGGGCG
GCCGACAATC CCTGGCCCGA ATGGCCGAAG GTCTATCGCA TGGACTACGG TCAGGAGGAA
GCCGCGGCGA AGTTTGGCGC GGATCCGCGC ATCTATCTCA CGACGGTTAA GAAGTTCGTC
GGCGACGAGA ACGGCGCCCT CAAGGAACTC GTGACGGTCG AGATCAAGTG GGAGAAGAAC
GAGAAGGGCC AGTTCGTGCC GAAGGAGGTT CCCGGCACGG AGAAGACCCG GCCTGCGCAG
CTCGTGCTGC TGGCGATGGG ATTCCTCGGG CCCGAGCAAG CGCTGCTCAA GGAGATCAAC
CTCGAGACCG ATGCGCGTTC GAACATCAAA GCCGAGCACG AGAAGTACAC GACCAACCTC
AAGGGTGTGT TCGCCGCCGG CGATTGCCGT CGTGGACAAT CACTCGTGGT GTGGGCGATC
AACGAAGGAC GCGGCGCCGC CAGAGAATGT GACCGCTATC TGATGGGCGC GACCGATCTA
CCGTGA
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| Protein sequence | MEEKKLRTQG ARCMDCGVPF CHTGKLISGM ASGCPINNLI PEWNDLVYRG LWKEALDRLH
KTNNFPDFTG RVCPAPCEGS CVLGINNPPV TIKNIEYSII ERGWEEGWVL PEPPKVRTGK
KVAVIGSGPA GLSAAAQLNK AGHTVTVFER ADRPGGLLMY GIPNMKLDKK EVVLRRVKLM
EQEGVKFICN ANVGENVEPQ IFLKEYDATV ICTGATQPRD LPIEGRNLKG VHFAMEFLTA
NTQALLNGGA EHSPIQAKGK DVIVIGGGDT GTDCVGTSMR HGAKSITQIE ILPKPPMDRA
ADNPWPEWPK VYRMDYGQEE AAAKFGADPR IYLTTVKKFV GDENGALKEL VTVEIKWEKN
EKGQFVPKEV PGTEKTRPAQ LVLLAMGFLG PEQALLKEIN LETDARSNIK AEHEKYTTNL
KGVFAAGDCR RGQSLVVWAI NEGRGAAREC DRYLMGATDL P
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