Gene Oter_0892 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_0892 
Symbol 
ID6207150 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp1096131 
End bp1097105 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content62% 
IMG OID641690515 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_001817780 
Protein GI182412714 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGTCC TCGTGACCGG CGCGGCCGGG TTCATTGGAT ACCATGTGGC CCGCCGGCTG 
GCTGAAACCA AGCACTGCGA AGTGCTCGGC CTCGACAACT TGAACGACTA CTACTCGGTC
GAGTTGAAAC GGGCGCGGCT CACGGAGCTG GAACAGTTGG AGGACTTCCG TTTCGTGCAG
GCGGACTTTG GAGAGGCAGC CGCCTTCGAA GGGATCTACA GCCATTTCAA ACCGGATTAC
GTGGTGCACC TTGGCGCTCA AGCCGGTGTG CGGCACAGTG CGGAGAATCC CGCCGCCTAC
ACCCACAGCA ACATCACCGG TTTCCTCAAC GTGCTCGAGG CTTGTCGACG CCGCCCGCCC
AAGCACCTGG TGTTCGCCTC CTCCAGCAGC GTCTACGGCG CGCACGCCGT CGTTCCCTTC
CGCGAAGACG CCAACACGGA TCACCCGATC TCCTATTATG GTGCGACGAA GAAGAGCAAC
GAGTTGATGG CGCACACCTA CGCTCACCTT TATGGGCTCA CCGTTACCGG GCTGCGCTTC
TTCACCGTCT ATGGCCCGTG GAGCCGACCG GACATGGCAC CGATCCTCTT TTCGCAGGCG
ATCTGTGCCG GTCGTCCCAT CAAGCTCTTC AATCAGGGGC GCAATCGCCG CGACTTCACC
TACGTCGACG ACATCGTCGA CGGCGTCGTG AAGGTCCTCC TCTACCCGCC GGCCACACTG
CCGGTGCCGC CGTTCCGGCT CTTCAACATC GGCCACAACC GCCCCGTCGA GGTCTTGCTC
TTTGTCCAAA TGCTCGAGGA ACTGCTCGGC AAGAAGGCCG TGGTCGAACT CGTGCCGCCG
CAACCGGGCG ACATGCTGGA AACCTGCGCG AGCATTGACC GGCTGCGCGA AGCCATCGGC
TATTCGCCTC GGATTTCGCT CGAGGATGGA CTGCGGCGGT TCGTCGACTG GTTCCGGCGC
TATTACCAGA GCTGA
 
Protein sequence
MKVLVTGAAG FIGYHVARRL AETKHCEVLG LDNLNDYYSV ELKRARLTEL EQLEDFRFVQ 
ADFGEAAAFE GIYSHFKPDY VVHLGAQAGV RHSAENPAAY THSNITGFLN VLEACRRRPP
KHLVFASSSS VYGAHAVVPF REDANTDHPI SYYGATKKSN ELMAHTYAHL YGLTVTGLRF
FTVYGPWSRP DMAPILFSQA ICAGRPIKLF NQGRNRRDFT YVDDIVDGVV KVLLYPPATL
PVPPFRLFNI GHNRPVEVLL FVQMLEELLG KKAVVELVPP QPGDMLETCA SIDRLREAIG
YSPRISLEDG LRRFVDWFRR YYQS