| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_0884 |
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| Symbol | |
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| ID | 6208155 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 1086592 |
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| End bp | 1087950 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641690507 |
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| Product | tRNA modification GTPase TrmE |
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| Protein accession | YP_001817772 |
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| Protein GI | 182412706 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0486] Predicted GTPase |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00450] tRNA modification GTPase TrmE |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCCAC TCGAGGACAC CATCGCCGCC CTGGCCACGC CGGCCGGAAT TTCGGCCTTG
GCGATACTTC GTGCCAGTGG TCCGGATACG CGACGGATCG CGGAGGCGAT TCTGGGGCGC
ACTCCCCTGC CCCGCCGGAT TCAACGCGTC GATTACCGGG ACCGCGCCGG GCACATCCTG
GACGAGGTTC TCTGCGTCTT TTTTCCCCAA CCGCGTTCCT ACACCGGCGA GGACCTCCTC
GAAATCTCGA CGCACGGCAA CCCCTTCATC GCCCAACGCG TGCTGCAGGA CCTTTTCGCC
CGCGGCTGCC GCCCTGCCGG GCCCGGCGAG TTCACTCAAC GGGCATTCTT GAATGGCCGG
CTGGACTTGA GCCAGGCGGA AGCCGTGATG GATTTGATCC ACGCGCAGAG CGACCGGGCG
CTCGCCGCCG CGAACCATCA GCTCAGAGGA TCGCTCGGGC GGCATGTGCA GCGGATCATC
GACCGCGTCG TGCGCGTGCT TGCGCAAGTC GAGGCGTATA TCGATTTCCC TGACGAAGAT
TTGCCCTCCA GCAATCGCGA CACCCTCGCT GCCGAGCTTG AGATGGCTCG TCACGAGGCG
GAGCAGCTCA TTGCCACCCA ACGTTATGGG AATCTGATCC GTGACGGGAT CAAGACGGTG
ATCGTAGGTG CACCAAATGT CGGCAAAAGC AGCCTGCTGA ATCGCCTCGT GGGCCGGGAG
CGAGCGTTGG TGAGCGCCGA ACCGGGCACG ACCCGCGACT TCATCGAGGA ACGGATCGCG
GTGGGCGAGC ATTGCATCCG GCTCGTCGAC ACCGCGGGCT TGAACGTCTC CCCCGCCCCG
TTGGAAGCGC TTGGCATCCA CAAGAGCTTG GAACAGCTGG CCGACGCTGA CTTGGTACTG
GCGATCGTTG ACCTGTCGGA TCCAGAACCC TCTCTTCCGC CGGAATTGGC GAAACGGCTC
GATCCCAAGA ATACTCTTCT GGTGGCAAAC AAGATAGATC TTTGCGCCGG GAAATGTGTA
TTAGATACTG TGGACCAATG GTTTGGGATG GTTTTTTGTT CGGCAAAGAT CGGTGTCGGT
TTGGACGACC TTTTCGGGGC CATTGGACGA TGGGCTGACC AATGGCAAAT TACAGTTGGT
CAAGACGTGA TTGCCGTGAA TGCCCGACAC AGCCATGCTC TCGCCCTCGC TCTTGAAGCT
CTGGATGCGG CTTTGGACAA GCTCCGCAGC GGAGACGCTG CGGAACTGCT GGCAAGCGAT
CTGAGATCCG CCTTGCTGGC ACTGGGTGAT ATTGCCGGTC GGGTCGATAA CGAACGCGTG
CTGGACGAGC TGTTCGCCAC CTTCTGTATT GGAAAGTAA
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| Protein sequence | MPPLEDTIAA LATPAGISAL AILRASGPDT RRIAEAILGR TPLPRRIQRV DYRDRAGHIL
DEVLCVFFPQ PRSYTGEDLL EISTHGNPFI AQRVLQDLFA RGCRPAGPGE FTQRAFLNGR
LDLSQAEAVM DLIHAQSDRA LAAANHQLRG SLGRHVQRII DRVVRVLAQV EAYIDFPDED
LPSSNRDTLA AELEMARHEA EQLIATQRYG NLIRDGIKTV IVGAPNVGKS SLLNRLVGRE
RALVSAEPGT TRDFIEERIA VGEHCIRLVD TAGLNVSPAP LEALGIHKSL EQLADADLVL
AIVDLSDPEP SLPPELAKRL DPKNTLLVAN KIDLCAGKCV LDTVDQWFGM VFCSAKIGVG
LDDLFGAIGR WADQWQITVG QDVIAVNARH SHALALALEA LDAALDKLRS GDAAELLASD
LRSALLALGD IAGRVDNERV LDELFATFCI GK
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