| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_0864 |
|---|
| Symbol | |
|---|
| ID | 6208751 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | - |
|---|
| Start bp | 1063660 |
|---|
| End bp | 1064985 |
|---|
| Gene Length | 1326 bp |
|---|
| Protein Length | 441 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641690487 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_001817752 |
|---|
| Protein GI | 182412686 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2211] Na+/melibiose symporter and related transporters |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGCCC GACGTCCGCT GGCGCTCGCC GAAATCATCA AGATGAGTTT CGGCTTCCTC
GGTATCCAGT TTGGCTGGGG GCTGCAGATG GCGAACATGA GCGCCATCTA CCAGTATCTC
GGCGCCAGCG AGAGTGAGAT TCCGCTCCTC TGGCTCGCCG CGCCGGTCAC CGGGCTCATC
GTGCAGCCGA TCGTCGGCTA CTATAGCGAC CGCACCTGGA CGCGGCTCGG CCGCCGCCGG
CCATATTTTC TCGTCGGCGC CATTCTCGCC AGCTTCGCGC TGCTCGCGAT GCCGAACTCG
TCGACGCTCT GGATGGCCGC CGGCCTGCTC TGGGTGCTCG ACGCTTCGGT GAACATCAGC
ATGGAGCCGT TCCGCGCCTT CGTTGGCGAT CTGCTGCCGC CAGAGCAACG CAAGGTCGGC
TTCGCAATGC AAAGCCTCCT GATCGGGCTG GGCGCGATCC TTTCGTCCGC GCTGCCCTGG
CTGCTCACGA ACGTCTTCGG GATGGCGCCC GGCACCGCGA GCGCCGACTC GCCAATCCCG
CTGGTCGTGC ACGTGTCGTT CTACATCGGC GCGGTCGTGT TCATCACCGC GGTACTCTAT
ACGGTGCTCA CCACGCCGGA GCATCCACCG GCGGATCTCG CCGCGTTCGA ACGGGAGAAA
GCCGCCAGCG CTGGCGCCTG GCATGCGGTC GTGGAAATTT TCCGCGGCTT GCGCGACACG
CCGCCGATCA TGCGGCGCCT CGCCGTCGTG CAGTTTTTCA CCTGGCTCGG ATTGTTCTGC
CTGTGGATCT ACTTCGCGCC GGCCATCGCA CGCAGTCTCT TCGGCGGCAC GCCGGGTTCG
CCGGAATACC AGCGCGGGGT GGAGTGGGGC GGTGTCTGCT TCGCGACCTA CAACGGCGTC
GCGTTCGCTT TTTCCTTCGC GCTGATCCCG CTCGCCCGCC GCTACTCGGC GCGCGCCATT
CACCGCGCCT GCCTGACTGC GGCCGCCCTC GGGTTGCTGG CCGTGGGCGT TTGGCAACAT
CCCACGCTGC TCCTGATCTC GATGCTGGGC GTCGGCATCG GTTGGGCGAG CATCCTGTCG
ATGCCCTACG CGCTGCTCGC CAACGTGATT CCTCCGGCCC GGATGGGATT CTACATGGGG
GTATTCAATT TCTTCATTGT CCTGCCGCAG ATCGTCGCCT CGGCGGGGCT CGGCTTCGTC
GTTGCGCATG GCTTCGGCGG TCAGGCGCTC TATGCCGTCC TGCTCGGTGG CGCGTCGTTG
GTGATCGCCG CGCTCGCGCT CTCGCTCGTG CCGCCGGATC ATGTGCCGGT CCCGGCGGAC
GCTTAG
|
|---|
| Protein sequence | MIARRPLALA EIIKMSFGFL GIQFGWGLQM ANMSAIYQYL GASESEIPLL WLAAPVTGLI
VQPIVGYYSD RTWTRLGRRR PYFLVGAILA SFALLAMPNS STLWMAAGLL WVLDASVNIS
MEPFRAFVGD LLPPEQRKVG FAMQSLLIGL GAILSSALPW LLTNVFGMAP GTASADSPIP
LVVHVSFYIG AVVFITAVLY TVLTTPEHPP ADLAAFEREK AASAGAWHAV VEIFRGLRDT
PPIMRRLAVV QFFTWLGLFC LWIYFAPAIA RSLFGGTPGS PEYQRGVEWG GVCFATYNGV
AFAFSFALIP LARRYSARAI HRACLTAAAL GLLAVGVWQH PTLLLISMLG VGIGWASILS
MPYALLANVI PPARMGFYMG VFNFFIVLPQ IVASAGLGFV VAHGFGGQAL YAVLLGGASL
VIAALALSLV PPDHVPVPAD A
|
|---|
| |