| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_0825 |
|---|
| Symbol | |
|---|
| ID | 6205193 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | - |
|---|
| Start bp | 1008113 |
|---|
| End bp | 1008637 |
|---|
| Gene Length | 525 bp |
|---|
| Protein Length | 174 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 641690448 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001817713 |
|---|
| Protein GI | 182412647 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0369421 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACCA CACGGCTAAC CCTCTCTGTT TTCCTTGCGG TGACTGCGGC AGCCGTTCTC
TCGGCTGCAG ACCCGAAGAC GCCGTCTCGC GTCGAAGTCA CCTTTACCGA TCCCGAAAAA
TTCACCGATG CTGCTGACGC ACAACGCGGC TCCGACTTTG GTCGCGAGGC CAACCTGCAG
GAGTTGCGCC AGTACATCGA GCGTCGAGCG ACCCGGTTCG TGCCCGAGGG GCAGAAGCTG
TCCGTCACGA TCACGGACGT CGACCTTGCG GGCGAAGTGG AACCGTGGCG GACCCCGCGG
ATGAGCGATG CGCGGTTCGT GAAGGATATT TATCCCCCCC GGATCGAGCT CAGCTTTAGG
CTGACGGACG CCAGTGGAGC CGTAATCAAG GAAGGCACGC GCAAGCTGTC CGACCTGACT
TTCATGATGA ACCTCCACGC GGTGAACCGC GACGATCCGC GCATCTACGA GAAGGATCTG
CTGGATCGCT GGATCAGCAG CGAATTCCGG CCGAACAAGA AGTAG
|
|---|
| Protein sequence | MKTTRLTLSV FLAVTAAAVL SAADPKTPSR VEVTFTDPEK FTDAADAQRG SDFGREANLQ
ELRQYIERRA TRFVPEGQKL SVTITDVDLA GEVEPWRTPR MSDARFVKDI YPPRIELSFR
LTDASGAVIK EGTRKLSDLT FMMNLHAVNR DDPRIYEKDL LDRWISSEFR PNKK
|
|---|
| |