| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_0823 |
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| Symbol | |
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| ID | 6205562 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 1005394 |
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| End bp | 1007349 |
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| Gene Length | 1956 bp |
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| Protein Length | 651 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641690446 |
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| Product | multi-sensor signal transduction histidine kinase |
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| Protein accession | YP_001817711 |
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| Protein GI | 182412645 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0452566 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCATCT CCGCTCCCGT CGCTGCTCCT CCCGCTGCAA GCCCCGCCAC GACCGCGGCG
CCTCCGGGCA CGTCGCGCAT GCACGCGCTG TTCGTCGCCT ATGGGCAACG GGTGATCGCA
CGGGCCCACC GGCTGTTCCT CTGGCTGCTG GTTGGCCAAT GGGTCGCAGC GCTCGTGCTG
GCCCTCCTGT TCCCCAGCCC GGCCGCCTGG CCGCTGGCCG CGGTCGGAGG CTCTGTTTTC
GCCGGACTCG CCATTGCACT CATCCGCTGG CGGCCGTTCA CGTTCGCCAG CCGCTGCGGC
GTCGCCCTCG CGCAGATCGG ATTCTGCGCG CTCTTCGTGC AGCTCACGGC CGGGCGGCTG
GAAATGTACT TCTGTTTCTT CGTGGCGATC GCCTTTCTCT CGCTGTATCG CGACTGGCGT
GTGCTGGTGA TCGCCGCCGC CGTCGCGATC AGCCACCTGA TGCTGACGCC GCTGTGGCAG
TCCGACGCGG CGTTGAGCCA GGCGGCACCG AGTTCGTGGT CGGGGGCAGA GTTCAATCTC
TGGCTGCTGC TCGAGACCGC CGTGCTGATC TGGGCCGGCC TCGCGGGACG CCGCGAGATG
CGCGAAACCT GCCGCGCGCA GGAGCAGCAT CAACTCCTGC TCGAAGAGCT CGAGCAACGC
GTGCGCGACC GCACCAAGCA CCTCGAGGCT GAGACCGCCG AGCGGGAACG TACGGCGCAA
GCGCTGCGCC AAAATGAGGA GCGCCACCGC AACCTCCTCG CGCGGCTCCC GATCGGCGTC
TTCGAAACCA CCCGCAGCGG CGTGGTGCGG TATGCCAATT CTTTCCTGCT CGGGATGGTC
GGATTGCCGG CCCATTTCGA TCCCACGATC ATCTCCCTGG CCGACGGCCG GATCTTTCCC
ACCGTCGATC GCGAACGATT CTGGCACCGG CTGGAGAACG AGCACGAGGT CCGCGGCTTC
GCCACGACGC TGCGCCATTT CGACGGCACG ATCTTCCACG TGGTCATCAA CGCGCGGCTG
AAGAACGCGC CCGGCGAGCC CGAATTGATG GCCGAGGGGA CGGTCGAAGA CGTCAGCGTC
CGGAAGCGCG CCGAACGCGA GCTCGACGTG CTGCACGGCC AGCTGATGCT CGCGTCGCGT
CAAGCCGGCA TGGCCGAAGT CGCCACCGGC GTGCTGCACA ACGTCGGCAA CGTGCTTACG
AGCGTGAACC TGATCGTCCA CGACGTGCAG GACCGGTTGA AGGGCACGCG GCTCACGCAC
CTGCATCGCG TCGTCGAGAT GCTGCAACGC GAACAGCCGC GGCTCGCGGA ATTTCTCGCG
CAAGACCCCG CCGGTCAGAA GCTGCCGGAC TTCCTCGCGA AGCTCGACGA GCATCTCGCC
GCGGAAAACC GGCAGTTGCT CACCGACGTC GACGGACTCG TACGTCATTT CGAGCACATC
CGCGAAATCA TCGTGACGCA GCAGGGCTCC ACGAAACTGT TCGGCGTGCT GGAATCCATC
CCACCGGCGC AGCTCTTCGA AGACGCCCTC CGGCTCAACG CGGAATCGCT CGACCGGCAC
GGCATCGCGC TCGACCGCTT GTTCGAGCCG ACTGCTTCCG TCAAGGCGGA CCGACACAAG
GTTCTGCAGA TCCTCGTCAA CCTGCTGAAG AACGCGAAGG ACGCGCTGCA GGTCATCAAG
CCCGGCGAGC GCCAGATCCG CGTGAAGGTC GCGGCCGTCC GCGATGACCG GATTGCGCTT
TCCGTCGAAG ACAACGGCCC GGGCATCGCG CCCGAAAACC TCACGAAAAT CTTCCAACAC
GGATTCACCA CGAAACCCAG TGGACATGGC TATGGCCTGC ACGCGAGCGT GCTCGCCGCG
CGCGAAATGG GAGGCGATCT GACGGCCGAG AGTCCGGGCG CCGGCCTCGG CGCCACGTTC
ACGTTGACGC TCCCTGTGGC GAAGCCGGCC CCGTGA
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| Protein sequence | MSISAPVAAP PAASPATTAA PPGTSRMHAL FVAYGQRVIA RAHRLFLWLL VGQWVAALVL
ALLFPSPAAW PLAAVGGSVF AGLAIALIRW RPFTFASRCG VALAQIGFCA LFVQLTAGRL
EMYFCFFVAI AFLSLYRDWR VLVIAAAVAI SHLMLTPLWQ SDAALSQAAP SSWSGAEFNL
WLLLETAVLI WAGLAGRREM RETCRAQEQH QLLLEELEQR VRDRTKHLEA ETAERERTAQ
ALRQNEERHR NLLARLPIGV FETTRSGVVR YANSFLLGMV GLPAHFDPTI ISLADGRIFP
TVDRERFWHR LENEHEVRGF ATTLRHFDGT IFHVVINARL KNAPGEPELM AEGTVEDVSV
RKRAERELDV LHGQLMLASR QAGMAEVATG VLHNVGNVLT SVNLIVHDVQ DRLKGTRLTH
LHRVVEMLQR EQPRLAEFLA QDPAGQKLPD FLAKLDEHLA AENRQLLTDV DGLVRHFEHI
REIIVTQQGS TKLFGVLESI PPAQLFEDAL RLNAESLDRH GIALDRLFEP TASVKADRHK
VLQILVNLLK NAKDALQVIK PGERQIRVKV AAVRDDRIAL SVEDNGPGIA PENLTKIFQH
GFTTKPSGHG YGLHASVLAA REMGGDLTAE SPGAGLGATF TLTLPVAKPA P
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