Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_0822 |
Symbol | |
ID | 6208635 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | - |
Start bp | 1004111 |
End bp | 1005394 |
Gene Length | 1284 bp |
Protein Length | 427 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641690445 |
Product | response regulator receiver sensor signal transduction histidine kinase |
Protein accession | YP_001817710 |
Protein GI | 182412644 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.165744 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACGTCC TGCTGCCACC GAACCGGCGC ATCCTGCTCG TCGACGACAA TCTGGCGATT CACGACGATT TTCGGCGGAT TCTCATGCCG ACGAGTTCCG CCAGCACGCT GGATGCCGAG GCCGCCTCGC TGTTCGGGGC CGCTGCGGAC GTCGCTCCGA GCGAGTCCGT CACGTTCCAA CTTGACTACG CCCAACAGGG CCAGGAGGCC TGCGAGAAAG CCGCGGCCGC TGTCGCTGCC GGCTGTCCCT ACGCGCTCGC TTTCGTCGAC ATGCGCATGC CGCCGGGCTG GGATGGGCTC ACGACCATTG CGAAGCTGTG GGAAATCGAC CCCGAGGTGC AGGTGGTGAT TTGCACCGCG TATTCCGATC GGAGCTGGAA CGAAATTCAG GCGGCGCTGA CCGCGCGCGA TCGCTGGCTG GTGCTCAAAA AACCGTTCGA CAAGGTCGAG GTACTCCAGC TCGCGCAGGC GCTCACCGAA AAATGGCACC TCACGCGGCT CTCCCGGCTC CAGCTCGCCA CGTTGGAGAA GCACGTCGCG GTGCGCACGG ATCAGCTGCG GCATGCGGTG CAGGTGAAGA ACGAGTTTCT GGCCAACATC ACGCACGAAC TGCTCACCCC GCTGCATGGT ATCATGGGCT CGCTCGCGCT GATGAGCGAA GACGCCCTCA ACGCGGACCA GGCCTCGTCC CTCGCCGACG TGCGTACCTG CGCCGAGAGT CTCAACCGGC TGCTGCAGCA GATCGTGGCG TTCAACCAGG CGGAAGCCGG CACGCTCGCG CTCGATCCGC TGCCCTGCAG CCCCGGCGAT CTGCTCACGC CGGTCGCGAA CGCCTACCGC GCCCGCGCGC GCCTCAAGGG CATCGCCCTG CGCACGCAGG TGGCGCCGTC ACTGCCGGCC GTGCTCCGCG CGCCGGCCCC CGTGATCCGG CAGATCCTCA CCGCGCTCAC GGACAATGCA CTCAAGTTCA CGGAATGCGG GGCGATCACG ATGCACGTCG GCGGCGAACC CGATTTGCTC TGCTTCACCG TTGAGGACAC CGGCATCGGC ATGACCGCCG AACAACTCAG CTGGGTCGGC TTGCCGTTCG CGCAGGTGGA CGGTGGACTG GCCCGCCGCC AGCCGGGGAT CGGGCTCGGA CTCCCGCTGG CCAAACGCCT CGCCACGTCG CTCGGCGGCG AACTCACGTT GAGTTCGCAA CCGGGTCGGG GCACGACTGC GACGTTCACC GCTCGGGCCG CGCCGTTGCA GTCAACTGCT CCCGCCCTGG AGGCGGCGCG GTAA
|
Protein sequence | MNVLLPPNRR ILLVDDNLAI HDDFRRILMP TSSASTLDAE AASLFGAAAD VAPSESVTFQ LDYAQQGQEA CEKAAAAVAA GCPYALAFVD MRMPPGWDGL TTIAKLWEID PEVQVVICTA YSDRSWNEIQ AALTARDRWL VLKKPFDKVE VLQLAQALTE KWHLTRLSRL QLATLEKHVA VRTDQLRHAV QVKNEFLANI THELLTPLHG IMGSLALMSE DALNADQASS LADVRTCAES LNRLLQQIVA FNQAEAGTLA LDPLPCSPGD LLTPVANAYR ARARLKGIAL RTQVAPSLPA VLRAPAPVIR QILTALTDNA LKFTECGAIT MHVGGEPDLL CFTVEDTGIG MTAEQLSWVG LPFAQVDGGL ARRQPGIGLG LPLAKRLATS LGGELTLSSQ PGRGTTATFT ARAAPLQSTA PALEAAR
|
| |