Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_0798 |
Symbol | |
ID | 6206491 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | + |
Start bp | 975987 |
End bp | 977042 |
Gene Length | 1056 bp |
Protein Length | 351 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641690421 |
Product | lytic transglycosylase catalytic |
Protein accession | YP_001817686 |
Protein GI | 182412620 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG4623] Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.44501 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCGTCC TTGCCGCCCC GATTCCGCAG CGTTGCTCCG CACGCGCACG GCCGAAATCC CGGCGCATCG CCCGCACGCT CGCAGCGTGG CTGCTGCTGA CCGGTTTCGC CGTCGCCGCG GAATCCGCGC CCAAGAAAGC AAACAACGAA GAGCCGCCGT CGACCGACCA GCTTTACGAG CTTGGCAAGT CACTGTTCGA GCAATACGCG CCGGCGGAGA TCAAGGAGGA ATACGAATTC CCTTCCAAGG AACAGTGGGA CCAGTTCGCG GCGCGGCTGC AGCAGGGATT GGAACAGGAC GACCTCTCGC TCCTCGCGCA GTATGAGCCG GAGGCGCGAA GCGCGCTCAC CGCGTTGCGG GCGTTTCCGG GTTACGAAGA TTACGCCGAC TGGCTCGAAG AGCGGCTCGA CTACATCGAG GCGGCGAAAA CCGCGACCAG CGCCGAAGCG GTCAAGCCCA CGCCGGCGCC CTCGCCTTCC ACCCCGGTGC CCGCGCCCAC TGCGCCGGCT CCGCGCGCCA CGAAGCCCGC GTCGTTACCC TATTACGACC TCTGGCTGCA ACGGGTGCAG AGCCGGCCCG TGCCGGAGCG CGCGGGAAAA CTGATGCCGT TGCTTCGCGA CGCGTTCGCC GAGGAAGGCG TCCCGCCCGA GATCGCGTGG CTCGCGGAGG CAGAATCCAC GCTCAACCCC AGCGCGCGCA GTCCGGCCGG CGCAAAGGGC CTTTTCCAAT TGATGCCCGA GACCGCGCGG AATCTCGGGC TCAGCACGTT CATTCCCGAC GAGCGCGGCG ATCCGGAAAA GTCCGCTCGC GCCGCCGCGA AGTATCTCCG CGAGTTGCAC GGTAAGTTCG GCAGCTGGCC GCTCGCCTTC GCCGCTTACA ACGGCGGCGA GGGTCGCGTG CGCCGACTGC TCAAGCAGAA GGACGCGTCC ACGTTCGCGG AGATCGCCTC CGCGCTGCCG TCCGAGACCC GCATGTATGT GCCGAAAGTC TGCGCGACCA TCGCCGTGCG CAGCGGCGTG GCGCCTGGCG AACTGGCGCC GCCACGCGCC AGCTAA
|
Protein sequence | MSVLAAPIPQ RCSARARPKS RRIARTLAAW LLLTGFAVAA ESAPKKANNE EPPSTDQLYE LGKSLFEQYA PAEIKEEYEF PSKEQWDQFA ARLQQGLEQD DLSLLAQYEP EARSALTALR AFPGYEDYAD WLEERLDYIE AAKTATSAEA VKPTPAPSPS TPVPAPTAPA PRATKPASLP YYDLWLQRVQ SRPVPERAGK LMPLLRDAFA EEGVPPEIAW LAEAESTLNP SARSPAGAKG LFQLMPETAR NLGLSTFIPD ERGDPEKSAR AAAKYLRELH GKFGSWPLAF AAYNGGEGRV RRLLKQKDAS TFAEIASALP SETRMYVPKV CATIAVRSGV APGELAPPRA S
|
| |