Gene Oter_0798 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_0798 
Symbol 
ID6206491 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp975987 
End bp977042 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content68% 
IMG OID641690421 
Productlytic transglycosylase catalytic 
Protein accessionYP_001817686 
Protein GI182412620 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG4623] Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.44501 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGTCC TTGCCGCCCC GATTCCGCAG CGTTGCTCCG CACGCGCACG GCCGAAATCC 
CGGCGCATCG CCCGCACGCT CGCAGCGTGG CTGCTGCTGA CCGGTTTCGC CGTCGCCGCG
GAATCCGCGC CCAAGAAAGC AAACAACGAA GAGCCGCCGT CGACCGACCA GCTTTACGAG
CTTGGCAAGT CACTGTTCGA GCAATACGCG CCGGCGGAGA TCAAGGAGGA ATACGAATTC
CCTTCCAAGG AACAGTGGGA CCAGTTCGCG GCGCGGCTGC AGCAGGGATT GGAACAGGAC
GACCTCTCGC TCCTCGCGCA GTATGAGCCG GAGGCGCGAA GCGCGCTCAC CGCGTTGCGG
GCGTTTCCGG GTTACGAAGA TTACGCCGAC TGGCTCGAAG AGCGGCTCGA CTACATCGAG
GCGGCGAAAA CCGCGACCAG CGCCGAAGCG GTCAAGCCCA CGCCGGCGCC CTCGCCTTCC
ACCCCGGTGC CCGCGCCCAC TGCGCCGGCT CCGCGCGCCA CGAAGCCCGC GTCGTTACCC
TATTACGACC TCTGGCTGCA ACGGGTGCAG AGCCGGCCCG TGCCGGAGCG CGCGGGAAAA
CTGATGCCGT TGCTTCGCGA CGCGTTCGCC GAGGAAGGCG TCCCGCCCGA GATCGCGTGG
CTCGCGGAGG CAGAATCCAC GCTCAACCCC AGCGCGCGCA GTCCGGCCGG CGCAAAGGGC
CTTTTCCAAT TGATGCCCGA GACCGCGCGG AATCTCGGGC TCAGCACGTT CATTCCCGAC
GAGCGCGGCG ATCCGGAAAA GTCCGCTCGC GCCGCCGCGA AGTATCTCCG CGAGTTGCAC
GGTAAGTTCG GCAGCTGGCC GCTCGCCTTC GCCGCTTACA ACGGCGGCGA GGGTCGCGTG
CGCCGACTGC TCAAGCAGAA GGACGCGTCC ACGTTCGCGG AGATCGCCTC CGCGCTGCCG
TCCGAGACCC GCATGTATGT GCCGAAAGTC TGCGCGACCA TCGCCGTGCG CAGCGGCGTG
GCGCCTGGCG AACTGGCGCC GCCACGCGCC AGCTAA
 
Protein sequence
MSVLAAPIPQ RCSARARPKS RRIARTLAAW LLLTGFAVAA ESAPKKANNE EPPSTDQLYE 
LGKSLFEQYA PAEIKEEYEF PSKEQWDQFA ARLQQGLEQD DLSLLAQYEP EARSALTALR
AFPGYEDYAD WLEERLDYIE AAKTATSAEA VKPTPAPSPS TPVPAPTAPA PRATKPASLP
YYDLWLQRVQ SRPVPERAGK LMPLLRDAFA EEGVPPEIAW LAEAESTLNP SARSPAGAKG
LFQLMPETAR NLGLSTFIPD ERGDPEKSAR AAAKYLRELH GKFGSWPLAF AAYNGGEGRV
RRLLKQKDAS TFAEIASALP SETRMYVPKV CATIAVRSGV APGELAPPRA S