| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_0797 |
|---|
| Symbol | |
|---|
| ID | 6207632 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | - |
|---|
| Start bp | 973121 |
|---|
| End bp | 975601 |
|---|
| Gene Length | 2481 bp |
|---|
| Protein Length | 826 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641690420 |
|---|
| Product | immunoglobulin I-set domain-containing protein |
|---|
| Protein accession | YP_001817685 |
|---|
| Protein GI | 182412619 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.431236 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCCCCA TTCATTCCCG CTTGGTCCGC ACCGGACTGT TGCTCGGCGC CTTGGCGTTT
TCCAGCTTCG CGTCGCTGCA CGCGCAAACG CTGTTCGGCT CGGACGATTT CAACGACAAT
ACGCTCACGA TCGGCGCTGG CCTCCGCTGG CGGTTCGAGA CTGACGTCAG CGGGAGCGGC
GGCGCGTTTG CCGAGCGCAA CCAACGGCTG GAGTTTACCG CGGCGCAATC CACGGGAGCG
ACGACACGCG CGCTCGGTTG GATCAGCCCG AGCACGAGCG GCGAATCGTT TGGCGTCGAC
TGGCAGGCCA CGGTGAAGGT GTCCAACTCG GCTGCGCCGG CTGCGGGTTT CGCCTCCGCC
GGACTCGAGG CCTACACGCT CGCGGACACC GGCGGCGGCA ATATCAGCAG CAGCGCCTAC
TACGGGGCGT ATCTCTCGAC CAGTGCGAGC AGCGGCAAGC AGTTGGTCGC GGAGTGGGGG
CGGTGGGACG CGACGCTGAA CGGCGGGAGC GGCGGCTGGG TGCGGAACAC GCAGGGAATC
CCGATCGCCG CCACGGCGAA CGTTCTCCTG CGGCTGACTT GGATCGCGGC CACGCGGACA
ATGACGGCTT CTTTCAGTAC GGATGGCGGC ACGCGGTTCG AGGCGGTGCG ATCGTTCGCG
CTTGCCGGTG CCGAGGCAGG GATTGGCGCG CCCTATGCCA ACGGCTTCGG CTTGCAGCTC
GTCGGGGTGG CGCCGACCAG CGGCGCGATC GCGGCCGGTC AGATCACTTT TGACGATATG
AGCGTGTCTC CGCTGGGCAC TGGCCGGTTC GCCGGTTCTG ACGATTTCAG CGGCGGTGCT
GACAAGTGGG AGTTCTTCTT TCGGCTGCCG TATCTGACGG AAGGCACGAA CGGACTGGGC
ACGTTCAACG GGTCCGCGTT CGAGTTCACC AAGGGCGCTG GCAAGGGCAG CTACCTGCTG
GAGTGGGACG GTGACGGCGT TCCGAAGAAC AACGTCGCGC GGACGCTGGC AAGTTACACG
ACGAGTTGGG TGATGGACGT GACCGCCACG AATCGGCACG TACCGGAGTC CGGCACCTTC
TCCGCCGTGA GCATCGAGGT CAGCGCGGGC GTTGATTCCT ACTACGAGAT TTCGCTGTTC
AGGACCAATA GCCAGCTGGT GGTGCGCGCT GAAGCCATGA GCCCGTCGGA TCCAGGCGTG
AACCTGACCG CGCCGGAGAA TGCAGGCGTG CGGCTGCGGA TCGCGTGGGA CGCCACCACG
AGACTCCTGA CGGCGAGCTG CAGCTTTGAC GACGGTGTCA CCTATTCGAC GCTGCGCACG
ATCGCGACCT CCGATTGGCC GACGCTCTCG ACGGGCGGAT TCTATTTTCA GGCGCTCGGC
TTCTCCACCA GCGCCGCGCC TATTGGAACG GGACAGCTGT TGCTGGACGA TTTCTCAGTC
AGAGCCGCTC CGACCGTCAC GGCCCAACCT GCCAGTCAAG CGCTCGCCGC CGGCGCCCCG
GTCGTGCTCA ACGTGGCGGC GGACGCCACG GCGACATTTC AGTGGCAGCA AAACGGCGGA
GCGGTCGCTG GCGCCACAAC TGACACGCTG ACGCTCGACA GCGTGCAGCC CGCCCAAACG
GGGCTATATC AGGCGCTGGT CACCAGCCCG GGCGGCGTGA CGGTGAGTGG CGCGGCCATT
GTGGGCGTAA CCACGACGAG CAAGGTGATT GGCACCGGCG AGGAAATCGG CGCGAATATC
AGGCACTCGA ACGGCAACGT GTTCGATCAG GTCGCCGTGA CGGGTGCGGC GGAATCGATC
ACGGCGGATT TTGCAGCGAA TCAGATTACG CGGACATCGT TCATCGATGC CGACAATGAC
ATCGTGCAGA TCGAGTTCAG CGGTCCCGGC ACGCTCTCGC TGGTGTTGGA CGCGCCGTCG
GGGCCGGCAC TGCCGGTGAA CTACAATCAA AACTTCAGCT ACATGAAGGG CCATGCGGGG
ATTGTGATCA CCGGCGCGAC CGAGCAGACG AACCTGTCGG TGTTTACCGT GGGCCGGGCG
ACGGCGGTGA ACCAGACGCT GTTCAAAGAC GGCGTGAACT ACGACGGGTT TGCGGACATC
GCCTTCATCG CGATCCAGAG CAGCAACGGC CGGTTCGGCG GCGTGCGGAC GGCAAACGCG
ACGTATTTCG CCAGTAAGGG GCTCACCGGG CTCTACGCAC CCGGGGTGAC GTTCGACGGG
CCGGTCTATC TTGGCGACAT CACGGCGTTC GACGAGGCGA CACCGGTGCT CGTGATCGGC
AGCGCCAACG GCAACACGTG GATCACGGGC GGCGACCTGG AGCAGGCCAA CGGCCGACCC
GTGCAGGTCA GCGGGTTGAC GCAGCTGCAG TTCCAGCCCG GCAGCGATTC GCACGGCAAC
ACGCTGTCCG CGCGCACGAA CCAAGCCCGG CTCGAGCAGG ACGGCACCGA CGTGACCACG
CAGATCGCGG TGAACCCGTA A
|
|---|
| Protein sequence | MLPIHSRLVR TGLLLGALAF SSFASLHAQT LFGSDDFNDN TLTIGAGLRW RFETDVSGSG
GAFAERNQRL EFTAAQSTGA TTRALGWISP STSGESFGVD WQATVKVSNS AAPAAGFASA
GLEAYTLADT GGGNISSSAY YGAYLSTSAS SGKQLVAEWG RWDATLNGGS GGWVRNTQGI
PIAATANVLL RLTWIAATRT MTASFSTDGG TRFEAVRSFA LAGAEAGIGA PYANGFGLQL
VGVAPTSGAI AAGQITFDDM SVSPLGTGRF AGSDDFSGGA DKWEFFFRLP YLTEGTNGLG
TFNGSAFEFT KGAGKGSYLL EWDGDGVPKN NVARTLASYT TSWVMDVTAT NRHVPESGTF
SAVSIEVSAG VDSYYEISLF RTNSQLVVRA EAMSPSDPGV NLTAPENAGV RLRIAWDATT
RLLTASCSFD DGVTYSTLRT IATSDWPTLS TGGFYFQALG FSTSAAPIGT GQLLLDDFSV
RAAPTVTAQP ASQALAAGAP VVLNVAADAT ATFQWQQNGG AVAGATTDTL TLDSVQPAQT
GLYQALVTSP GGVTVSGAAI VGVTTTSKVI GTGEEIGANI RHSNGNVFDQ VAVTGAAESI
TADFAANQIT RTSFIDADND IVQIEFSGPG TLSLVLDAPS GPALPVNYNQ NFSYMKGHAG
IVITGATEQT NLSVFTVGRA TAVNQTLFKD GVNYDGFADI AFIAIQSSNG RFGGVRTANA
TYFASKGLTG LYAPGVTFDG PVYLGDITAF DEATPVLVIG SANGNTWITG GDLEQANGRP
VQVSGLTQLQ FQPGSDSHGN TLSARTNQAR LEQDGTDVTT QIAVNP
|
|---|
| |