Gene Oter_0784 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_0784 
Symbol 
ID6208673 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp957174 
End bp957914 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content72% 
IMG OID641690407 
ProductBaf family transcriptional activator 
Protein accessionYP_001817672 
Protein GI182412606 
COG category[K] Transcription 
COG ID[COG1521] Putative transcriptional regulator, homolog of Bvg accessory factor 
TIGRFAM ID[TIGR00671] pantothenate kinase, type III 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCACGC TCGCGATCTC TCTCGGCAAC ACCTCGCTGT TCGGGGGCGT GTTCGTGGAC 
GACCGGCTGA GCCGAACGTT TCGTCTGGCA CATGGTGAGC TGCACCGGTT GCCGGCGCAG
GTCGGCAAGT CGATCGACGC CGCGGCGGTT TGTTCGGTCG TGCCCGCGCT CACCGCACGC
GTCGTCACGC GGATCCGGCG CACCTGGCGA ATCCAGCCCG GGATGCTCAC CGCCGACACC
GCGCACGGAC TGACGATCAG GTATCGCCGA CCGCGCGAGC TCGGCACCGA CCGGCTCGCC
GCCGCGCTCG GCGCGCGGGC GCTTTATCCG CGCCGCCACG TGATCGTCGT CGACTGCGGC
ACTGCGACCA CCGTGACGGC ACTGCATCGC GACGGCCGGT TGCTGGGCGG CGCGATTTTG
CCCGGCGTCA CCCTCTGGGT CGACGCGCTC GCCGTTCGCA CGGCCCAATT GCCGCGGATC
GCACCGCGGC GTCCGCGCAC GGCCGTCGGC CGCTCCCCCA TGGAGGCGAT CGCCAGCGGC
GTATTCTTCG GTCACCTCGG CGCCGTGCGC GAGCTCGTGG CCCGCGTGCG CCGCGAGTCC
TTTGGGCGCG GGGCCGCGAT CGTGGTCGGC ACCGGCGGAC ATGCCCCGCT GTTCGGCCAC
GACGGGCTCT TCGACGCCCT CGTCCCCGAT CTGGTGCTCC GCGGCCTGCA CGTCTTCGCC
GCGTCCCGTA AAGTAAGCTA A
 
Protein sequence
MRTLAISLGN TSLFGGVFVD DRLSRTFRLA HGELHRLPAQ VGKSIDAAAV CSVVPALTAR 
VVTRIRRTWR IQPGMLTADT AHGLTIRYRR PRELGTDRLA AALGARALYP RRHVIVVDCG
TATTVTALHR DGRLLGGAIL PGVTLWVDAL AVRTAQLPRI APRRPRTAVG RSPMEAIASG
VFFGHLGAVR ELVARVRRES FGRGAAIVVG TGGHAPLFGH DGLFDALVPD LVLRGLHVFA
ASRKVS