| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_0714 |
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| Symbol | |
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| ID | 6206113 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 879461 |
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| End bp | 881035 |
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| Gene Length | 1575 bp |
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| Protein Length | 524 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641690338 |
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| Product | ECF subfamily RNA polymerase sigma-24 factor |
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| Protein accession | YP_001817603 |
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| Protein GI | 182412537 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog
[COG1639] Predicted signal transduction protein |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.346608 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGATCA CACGCGAGAC GATCCTCGAG GTGGCGGGTT CGCTTCCGCC GGCTTCCCAG
GTTTTCTCCG AGTTAGGAGT GATTCTGCGA CGCCCGGACG CGCGGCTGGA TGAGATCGCC
ACGTTGATGA AGCGCGATTC GACGCTCGCG GCGAACCTCA TTCGGATCAG CAACAGTGTC
GCGTATGGTG GCGAGCAGAA GGTGGGCTCG GTCGAGGAGG CACTCGCCCG CGTGGGCATG
AAGGAGGTTT TCCGGCTGGT GAGCCACGTG GCGAGCGCAC AGCTTGTGGA CCGGACGTTG
AGCAACTACG GGATCGAAGC GACGGAGCTG CGTGAACAGA TGCTGCAGAC CGCGTTCATC
TGCGAGCACC TTGCCGAGGA ATGCGATCTG GATCCGCGGA GCGCCTATAC GGCGGGACTG
ATGCGTCCGC TCGGTTTGCT GGTGCTCGAT CGACTGGCGG AGCGCTACGA GATGGAGCCC
TACCATCCGA TCAACGACCC GGACTACCTG GCTTGGGAGG GGCGGGTGTT CGGCATTGCG
AGCTCCGAAG TCGCCGGGAT GGTGCTGTCG CAGTGGAGCT TCCGGGATGA CATCGTCGAA
GCGGTGCGCA GCCAATACCT GATCCGCGTG GAGGATGCGC AGGATCGGCT GGCGTGCCTG
TTGAACCTTT CCGGCGGGTT GGTGGCGGAC GCCGGGCACG CGCTCTTGGG CGAGACGCGA
CATTGGGGCG TCACGCCGGC GAAATTGCAG GCGCTCGGCG TCAGCGACGA AGCGCTGCGC
GCCGCGGGGA AGCGAGCGTT CAAGGCATTT GCCGCGTTCC AGAACCGGAT GGCGGAGCGG
GCCGAAGCGG CCGAGGCCGA GGAGCCTGCG CCGCCGGTCG CGCCCATCGC GCCGCCCATA
GCGGAAAGTC CGCCGCCGGA GCCGGTCGCC ACCGAGGAGG AAACCTGCAA CTTTGCGCCG
GAGGAGGGGG TATTGCACGC GAACGATGAA CGCCCAGTGC AAACTTCACC CGCGGGGCTG
ATCACCCCGA CCGACTTCAC GACCTTCATG CGCAATTATC AGGACATGGT CTTCTCCACG
GCAGTGCGTC TGGTCGGCAA CGAGGCGCAG GCGGAGGACA TCTCGCAGGA GGTTTTCCTG
AAGGCGTATG AACGTTTCGA TTCGCTGCAG TCCAGCCCGA CGGCCGGGGG CTGGCTGAAG
ACTGTCGCCA CCAACCTTTC GCTGAACCAT CTCTCGCGTT ACCGCAACCG CTGGCGGTTC
TTTTCGGAAT TCCGCCGCGA GGACGATGCC GGCGACGACC AACCCGAGAT CGAGTTCGCT
TCGCCCGACA CGTTCTTCGC CGGCATGGAT GCGGGGGAAC GACGCGAATG GGTGGACGCC
GCGCTCGACA AGCTGCCCGA ACATCAGCGC GTGCCGCTGG TGCTCTATCA TTTCGAAGAT
ATGTCCTACG AGGACATCGC GAAGCGGCTG CGCATCTCGC TGGCCAAGGT CAAGACCGAC
ATCCTCCGCG CGCGCGCCGC GTTGGCGCGC ATTCTCGAAC GCAGCGGAGC TCCGCACGAA
AAACTCACCG CCTGA
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| Protein sequence | MAITRETILE VAGSLPPASQ VFSELGVILR RPDARLDEIA TLMKRDSTLA ANLIRISNSV
AYGGEQKVGS VEEALARVGM KEVFRLVSHV ASAQLVDRTL SNYGIEATEL REQMLQTAFI
CEHLAEECDL DPRSAYTAGL MRPLGLLVLD RLAERYEMEP YHPINDPDYL AWEGRVFGIA
SSEVAGMVLS QWSFRDDIVE AVRSQYLIRV EDAQDRLACL LNLSGGLVAD AGHALLGETR
HWGVTPAKLQ ALGVSDEALR AAGKRAFKAF AAFQNRMAER AEAAEAEEPA PPVAPIAPPI
AESPPPEPVA TEEETCNFAP EEGVLHANDE RPVQTSPAGL ITPTDFTTFM RNYQDMVFST
AVRLVGNEAQ AEDISQEVFL KAYERFDSLQ SSPTAGGWLK TVATNLSLNH LSRYRNRWRF
FSEFRREDDA GDDQPEIEFA SPDTFFAGMD AGERREWVDA ALDKLPEHQR VPLVLYHFED
MSYEDIAKRL RISLAKVKTD ILRARAALAR ILERSGAPHE KLTA
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