| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_0712 |
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| Symbol | |
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| ID | 6205584 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 877087 |
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| End bp | 878991 |
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| Gene Length | 1905 bp |
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| Protein Length | 634 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641690336 |
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| Product | RDD domain-containing protein |
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| Protein accession | YP_001817601 |
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| Protein GI | 182412535 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1714] Predicted membrane protein/domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.226192 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACTC CAGCCCGCAC TTTTTTCCTG GCCGCGCTCG CGTCGTGGAT GGCGCTGACT
GCTGCGGCTC TGGCGCAGAA CGATCCCGCG CCAGCGGCTC CGGATCAGTC CACCCCTGCG
GCTCAACCCA GCGCCACGAC GGCCGACCCG CAGACCGCGC CCGCCGCCGA GGAACCAAAA
GCGGCACCGG TGGCGGAACA GCCGGCCGCT CCTGAGGCGG CGCCCGCCAG CGCGGCGGAG
CCGGAGATGC GGCGGCTTGA TCAACCTGCG GCCGAGGAGA CCGAAACCAG CGCTGCCACG
AACGACGAGG CGACAAGCAC CGACGAGCAG AAGGTGGAGA CACAGGCGCC CGACGCTCCC
GAGGCGCCTC CCGCTCCCGC ACCCAAGGCC GAACGCAAGT GGGAGCGGCA GCAGTTCAAC
CGCCACGCGG GCAATGAGCG GGTTTCGATC TGGCAGGATT CCACCCTTGC GGAGGGCGAG
GAGGCCGGCG CGGTCGTGTC CATCGTCGGA TCTTCCACCT CCGCCGGCAA GGTTAGCGAT
GCCGTCGTCT CCATCCTTGG CTCGTCGACG TCCTCCGGCC ACGTAGGTGG GGCGGTCGTA
TCCGTTTTTG GCAGCTCGCG CATGACGGAC GGCAGCGTCG GCGACGCCGT CGTCTCCGTG
CTCGGCAACA CCTATGTCAA CGGCCGGGTC CGCGGCGACG TCGTCGCCGT GCTGGGCAAC
GTGGAACTCG GGCCGCAGGC CGAGGTTCAC GGCCAGATCG TTTGTGTTGG CGGCAAGGTC
AACCGCGACG CGGCCGCCCA GGTTCACGGT CAGGTCAACA ACATTGCCAT GGGATTCAGC
TTCGGCGGAT TCGAATGGCT GCACGCCTGG ATTTCCCAGT GCCTGCTCTA TGGACGGCCC
CTCGCCTTCG GGCCGCATCT GATGTGGGCG TGGTGGATCG CGATCGGGTT CTTCGTCCTC
TACCTGGCGT TCGCGTTGTT GTTCCCGCGC GGGATTGTGC GCTGCGCGGA GACGTTGGAG
CAGCGCCCCG GTTTCTCGAT TCTCACCGCG TTCCTGGTCA CGCTGCTGGC GCCCGCGGCG
GTGGTGATCC TCGCGATCAC GGTGATCGGC ACCCCCGCCG TGATCCTCGG GCTCTTCGTG
GCCGGACTGT TTGGGAAGGC TGCGATGTTC GCGTGGGTCG GCCGGCGCAT CACCCGTTTC
CTGGGAAATG GTCCGCTGGC GCATCCGTTC TTCGCCGTCC TGATCGGTGG CGTGATCGTG
CTGTTGCTCT ACACCGTGCC CGTCGTCGGC TTCGTCGTCG CGAAGCTCAC CTCGTGGCTC
GGCGTCGGCA TTGTAATCTA TACCCTGATT CTCGTCATGC AGCGGAACAA GGCCGCCCGC
CTGCCCGCGG TGGCGGCGGC GGCACCGGCG ACCACAATCC TCCCGGCAGT CGCTCCGCTC
GGAGCTACGG GCGCCAGCGC CTCCATGTCG ACCGCCGACG CTGGCGTGGC CAGTGCGCCC
GTTTCGGTGG TCGTGTCGGC GGCGACGCTC ACGCGAGCCG GTTTCTGGAT ACGCGCTGCG
GCGTCGCTGA TCGACGCGGC GATCGTCGCG GTGGCGGTGA ATCTGTTCCC GGATCGCTGG
GAGCCGAACT TCCTGCTGTC GTTCGCGACT TATTGCGTGG TCCTGTGGGC AACCAAGGCG
ACGACGATCG GCGGCATCGT CTGCAGCCTC AAGGTGGTGC GGCTCGATGA TCGCAAGCTC
GACTGGCCGA CCGCGCTGGT GCGCGTGCTT GGCGGCTTCA TCTCGCTGAT TCCGGCGGGC
CTCGGGTTCA TCTGGGTCGC CTTCGACGAC CAGCGGCAGT CCTGGCATGA CAAGATCGCC
GGCACCACCG TGGTGTATGT GCCGCGCGGC CTGTCGCTGC TGTAG
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| Protein sequence | MKTPARTFFL AALASWMALT AAALAQNDPA PAAPDQSTPA AQPSATTADP QTAPAAEEPK
AAPVAEQPAA PEAAPASAAE PEMRRLDQPA AEETETSAAT NDEATSTDEQ KVETQAPDAP
EAPPAPAPKA ERKWERQQFN RHAGNERVSI WQDSTLAEGE EAGAVVSIVG SSTSAGKVSD
AVVSILGSST SSGHVGGAVV SVFGSSRMTD GSVGDAVVSV LGNTYVNGRV RGDVVAVLGN
VELGPQAEVH GQIVCVGGKV NRDAAAQVHG QVNNIAMGFS FGGFEWLHAW ISQCLLYGRP
LAFGPHLMWA WWIAIGFFVL YLAFALLFPR GIVRCAETLE QRPGFSILTA FLVTLLAPAA
VVILAITVIG TPAVILGLFV AGLFGKAAMF AWVGRRITRF LGNGPLAHPF FAVLIGGVIV
LLLYTVPVVG FVVAKLTSWL GVGIVIYTLI LVMQRNKAAR LPAVAAAAPA TTILPAVAPL
GATGASASMS TADAGVASAP VSVVVSAATL TRAGFWIRAA ASLIDAAIVA VAVNLFPDRW
EPNFLLSFAT YCVVLWATKA TTIGGIVCSL KVVRLDDRKL DWPTALVRVL GGFISLIPAG
LGFIWVAFDD QRQSWHDKIA GTTVVYVPRG LSLL
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