| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_0705 |
|---|
| Symbol | |
|---|
| ID | 6207493 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | - |
|---|
| Start bp | 867398 |
|---|
| End bp | 868579 |
|---|
| Gene Length | 1182 bp |
|---|
| Protein Length | 393 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641690329 |
|---|
| Product | signal transduction histidine kinase, LytS |
|---|
| Protein accession | YP_001817594 |
|---|
| Protein GI | 182412528 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3275] Putative regulator of cell autolysis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.967481 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.432881 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCTCGT TTCCAACCCC AGCTTGGTTA CGTCGGCACC TGCCCCAGAC CGCCGCTCCG
TTTCCCCTTC GGCTCCAGAT TGGCTTTGGG GCGGTGGCGG CGGCTTTGTT GGGAATCGGC
TACGTGCTGG AACACTACTT CGCCCGGGCT TTGGTTGAGG CTCCCTGGGG GGCGAGTTCA
CGCGGCTGGG ATTCGATCGC TTGGTTCGTC TGGCTGATGG CTGCGCCGGC CGTTCTGGTG
CTGGTGCTGC GATTCCCGCT CACCCGCGGC GACCTCGCTC GCAACCTCCC AGGATCTGTC
GTGGCTGCGG CCACGCTCTA TGCGGCGGTG GTCGGGGCTC GCTTCGCGTT GCGGATGCTG
CTGCAACCCT GGACGGATTC CGCTGACAAG CTGGCGTTCG ACTGGCCGAC CTTCTGGGCA
TTCAACCTCG CCGCGCTGCC GATGGACTTT CTCACGTTTG GCGGCTTCCT GGCGGCGGCG
ATCGCCATCG ACTACTACCG GAGGCACTGT GAGCACGCGG AGGAAACACT GGCGCTACGG
CTGCGTACGG CCCAGCTCGA GTCCGATCTG GCGCGCGCGG AACTCACCGC GCTGCGCGGG
CAGTTGCACC CCCATTTCCT GTTTAACAGT TTCAACGCGG TCAGCACGCT CGTGCGGCAG
GGGCGGCACG AGGCGGCCAT CGAGACGATT GCCCAATTGA GCATGTTGCT CCGACTGGCG
ATGGAGCGCA CGGGGCAGCA GGAGTTGCCG CTCGAAACCG AGATCGATTT CGTCCGGCGT
TATCTCGAGA TCGAGAGGAT TCGGTTTGGC GAAAAACTAC AGGTGGAAAT CTCGGTTGAG
CCGGAAGCGA ACCGGGCGCT GGTGCCGAAC TTTTTGTTTC AACCGCTGGC GGAAAACGCG
ATCAAGCATG GCATCTCCCG GCGGACGGTA CCGGGCCGGG TGCACATCGC CGCCGTACGC
GCCGCGGATC GCTTGATGCT CGTGATCGAG AACGACGGGG CTCCGCAGGC GTCGCCGGGG
GCCGGCGCAG AGACTCGAGC GGGCGGCGTG GGTCTCGCGA ATACGCGGGC GCGATTGGAA
AAAATCTACG GCTCCGATTA CGATCTGGAG ATGATTCCCC AGACGGACGG CGGAATGCGG
ATCCAGATCA ACTTGCCCTG GCGGGCATCA CCCCTGCTTT GA
|
|---|
| Protein sequence | MTSFPTPAWL RRHLPQTAAP FPLRLQIGFG AVAAALLGIG YVLEHYFARA LVEAPWGASS
RGWDSIAWFV WLMAAPAVLV LVLRFPLTRG DLARNLPGSV VAAATLYAAV VGARFALRML
LQPWTDSADK LAFDWPTFWA FNLAALPMDF LTFGGFLAAA IAIDYYRRHC EHAEETLALR
LRTAQLESDL ARAELTALRG QLHPHFLFNS FNAVSTLVRQ GRHEAAIETI AQLSMLLRLA
MERTGQQELP LETEIDFVRR YLEIERIRFG EKLQVEISVE PEANRALVPN FLFQPLAENA
IKHGISRRTV PGRVHIAAVR AADRLMLVIE NDGAPQASPG AGAETRAGGV GLANTRARLE
KIYGSDYDLE MIPQTDGGMR IQINLPWRAS PLL
|
|---|
| |