Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_0700 |
Symbol | |
ID | 6206459 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | + |
Start bp | 858259 |
End bp | 859206 |
Gene Length | 948 bp |
Protein Length | 315 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641690324 |
Product | transaldolase A |
Protein accession | YP_001817589 |
Protein GI | 182412523 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0176] Transaldolase |
TIGRFAM ID | [TIGR00874] transaldolase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.420489 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.432881 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCCACCA ACCAACTCGA GCAGCTGAAG CAATTCACCA CGGTCGTCGC GGATTCGAGC GATTTCGACA GCATGAAATC CTACCAGCCG CGCGATGCGA CGACCAATCC CAGTTTGATC CTCAAGGCTG CGGGGATGCC GGACTACGGG CACTTGGTGG AGAAGGCGAT CACGGACGCC GGCAGTGGCG CATCGCCCGC CGCGGTCATC GACCTGCTGC TCGTCCTGTT TGGCGCCGAG ATTCTCAAGA TCGTGCCCGG GCGGGTCTCG ACGGAGGTCG ACGCCCGGCT CTCGTTCGAC CGCGTCGGCA GCATGGAGAA GGCGCGGACG CTCATCGCGC TTTACGAAAA GCAGGGTGTC CCGCGCGAGC GGATCCTCAT CAAGCTCGCG TCGACTTGGG AAGGCATTCG CGCCGCGGAA AAGCTCCAGC AGGAGGGGAT CAACTGCAAC ATGACGCTGT TGTTCTCGTT TCCCCAGGCG GTGGCCGCCG CCAAGGCCAA GGTGAAGCTG ATCTCGCCGT TCGTCGGTCG GATCCTCGAC TGGTACAAAA AAAGCACCGG CCAGGACTAC GCGCCGGCGG ACGATCCCGG CGTAAACTCG GTTCGCGAAA TCTACACCTA CTACAAACGC TTCGGCTACG AAACCGAGGT GATGGGCGCG AGCTTCCGCA ACAAGGACGA GATTCTGGAA CTCGCCGGAT GCGATCTGCT GACGATTGCG CCGAAGTTGC TCGGAGAGCT CGCGGCGTCG ACCGATCCGG TGGAACGCAA GCTGGAGCCG GAGGCCGCGC GAAAGGCGAA GGTAAAGCGC GTGAGCTTCG ACGAAAAATC TTTCCGCTGG GCGTTGAACG AAGACCAGAT GGCGACGGAA AAATTGTCCG ATGGGATCCG TTCGTTCGCG GCCGATGTGC GCAAGCTCGA GCAGCTGATC CAGCAGCAGC GCGGGTAG
|
Protein sequence | MPTNQLEQLK QFTTVVADSS DFDSMKSYQP RDATTNPSLI LKAAGMPDYG HLVEKAITDA GSGASPAAVI DLLLVLFGAE ILKIVPGRVS TEVDARLSFD RVGSMEKART LIALYEKQGV PRERILIKLA STWEGIRAAE KLQQEGINCN MTLLFSFPQA VAAAKAKVKL ISPFVGRILD WYKKSTGQDY APADDPGVNS VREIYTYYKR FGYETEVMGA SFRNKDEILE LAGCDLLTIA PKLLGELAAS TDPVERKLEP EAARKAKVKR VSFDEKSFRW ALNEDQMATE KLSDGIRSFA ADVRKLEQLI QQQRG
|
| |