| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_0670 |
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| Symbol | sdhA |
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| ID | 6204653 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 821902 |
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| End bp | 823824 |
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| Gene Length | 1923 bp |
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| Protein Length | 640 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641690292 |
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| Product | succinate dehydrogenase flavoprotein subunit |
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| Protein accession | YP_001817559 |
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| Protein GI | 182412493 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | [TIGR01811] succinate dehydrogenase or fumarate reductase, flavoprotein subunit, Bacillus subtilis subgroup |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTAAAC TCGAATCTCG CATCCCCTCC GGCCCGCTCG CCGACAAATG GCGCAAGCAC
AAGGCGGAGA TCCGGCTCGT CAATCCCGCC AACAAGCGGA AATACGAGGT GATCGTCGTC
GGGGCCGGCC TCGCCGGTTC CTCCGCGGCC GCCACGCTGG CCGAGCTCGG CTACAAGGTG
AAGTGCTTCG TCTATCACGA CAGCCCGCGC CGTGCCCACT CGATTGCCGC GCAGGGCGGC
ATCAACGCCG CGAAGAATTA CCAGAACGAC GGCGACAGCG TTTACCGGCT GTTCTACGAC
ACGATCAAGG GCGGCGATTA TCGCTCCCGC GAAGCCAACG TCCACCGGCT CGCTGAGGTT
TCCGTCAACA TCATCGATCA GTGCGTGGCG CAGGGCGTCC CGTTTGCGCG CGAATACGGC
GGCCTGCTCG CGAACCGCTC GTTCGGCGGT GCGCAGGTGT CGCGTACGTT CTACGCCCGC
GGCCAGACCG GCCAGCAGTT GCTGCTCGGC GCTTACTCGG CCTTGTCGCG GATGATCGGT
CAGGGCGCGG TCCAGCTTTT CGCCAACACC GAGATGCTCG ATCTCGTCAT CGTCGATGGC
CAGGCGAAGG GCATCATTAC GCGCAATCTG ATCACCGGTG AAATCGCCCG CCACGCGGCC
GATGCGGTGA TCCTCGCGAC GGGTGGCTAC GGCAACGTTT TCAATCTTTC CACCTACGCC
CGGCAGTCCA ACGCCACCGC GATCTGGCGC GCCTACAAGA AGGGCGCGTG CTTCGCGAAT
CCGTGCTTCA CGCAGATCCA CCCGACCTGC ATTCCCGTCA CCGGCGACTA CCAGTCGAAG
CTGACGCTGA TGTCCGAGTC GCTGCGCAAC GACGGCCGGA TCTGGGTGCC GAAGCGCGCG
GAGGACCGCC GCAAGGATCC GAACACGATT CCGGAGGCCG ACCGCGACTA CTATCTCGAG
CGCATGTATC CGAGTTTCGG CAACCTCGCC CCGCGCGACA TCTCCTCGCG CGCGGCCAAG
CGCGTGTGTG ACGAGGGTCG TGGCGTGGGG GAGAGCGGGC TCGGCGTCTA TCTCGACTTT
GCCGACGCGA TCAATCGCCT GGGCGAAGCG GCTGTCCGCG AGCGCTACGG CAATCTGTTC
GACATCTATC ACGAGATCAC GAACGAGAAT GCCTACAAGG TGCCGATGCG CATCTACCCG
GCCGTCCATT ACACGATGGG CGGGCTCTGG GTGGACTATA ATTTGATGTC CAACGTCCCG
GGCCTGTTCG TGCTGGGCGA GGCGAATTAT TCCGATCACG GCGCCAACCG GCTCGGCGCC
TCGGCGCTGA TGCAGGGGCT GGCCGACGGC TACTTCGTCA TTCCCTACAC CATCGGCGAC
TACCTCGCGA CCCAGAAGCC CGGCTCGCGT CCCTCCGTCG ACGCCGCTGA GTTCAAGGCC
GCCGAGGCCG CGATCGTGGG GCTCACGCAG CGGCTGCTGA GCATCAACGG CAAGGAACCC
GTCAGCCATT TCCACAAGCG CCTGGGCAAG ATCATGTGGG ACGGTTGTGG CATGGCCCGC
ACCGCTGCGA CGCTGCAGAA GGCGCTGCAG GAAATTCCGA AGCTGCGCGA GGAATTCTGG
GCGAACGTGA AGGTGCCCGG TTCCGCCGCG ACCTTGAACC AGTCGCTCGA GCAGGCCGGC
CGGGTGGCCG ATTTCCTCGA ACTCGGCGAG TTGCTCTGCC TCGACGGCCT CACGCGCGAG
GAGAGCTGTG GCAGTCACTT CCGCGAGGAA TACCAGTATC CGGACGGCGA GTGCAAACGC
GACGACGAGA AGTTCGCCCA CGTGGCGGCC TGGGAGTTCC AGGGCGACGG CAAGCCGCCG
CTGCGCAACG TCGAGCCGCT CACCTACGAA ACCGTCAAAA TGTCGGTCCG GAACTACAAG
TAA
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| Protein sequence | MAKLESRIPS GPLADKWRKH KAEIRLVNPA NKRKYEVIVV GAGLAGSSAA ATLAELGYKV
KCFVYHDSPR RAHSIAAQGG INAAKNYQND GDSVYRLFYD TIKGGDYRSR EANVHRLAEV
SVNIIDQCVA QGVPFAREYG GLLANRSFGG AQVSRTFYAR GQTGQQLLLG AYSALSRMIG
QGAVQLFANT EMLDLVIVDG QAKGIITRNL ITGEIARHAA DAVILATGGY GNVFNLSTYA
RQSNATAIWR AYKKGACFAN PCFTQIHPTC IPVTGDYQSK LTLMSESLRN DGRIWVPKRA
EDRRKDPNTI PEADRDYYLE RMYPSFGNLA PRDISSRAAK RVCDEGRGVG ESGLGVYLDF
ADAINRLGEA AVRERYGNLF DIYHEITNEN AYKVPMRIYP AVHYTMGGLW VDYNLMSNVP
GLFVLGEANY SDHGANRLGA SALMQGLADG YFVIPYTIGD YLATQKPGSR PSVDAAEFKA
AEAAIVGLTQ RLLSINGKEP VSHFHKRLGK IMWDGCGMAR TAATLQKALQ EIPKLREEFW
ANVKVPGSAA TLNQSLEQAG RVADFLELGE LLCLDGLTRE ESCGSHFREE YQYPDGECKR
DDEKFAHVAA WEFQGDGKPP LRNVEPLTYE TVKMSVRNYK
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