| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_0648 |
|---|
| Symbol | |
|---|
| ID | 6206632 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | + |
|---|
| Start bp | 793637 |
|---|
| End bp | 794155 |
|---|
| Gene Length | 519 bp |
|---|
| Protein Length | 172 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 641690271 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001817538 |
|---|
| Protein GI | 182412472 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.814112 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTCAGCT CCATTCTGCT AGCACCTTCG CACAAAACCC GCCCCCAGGG TCCGCGGCGA
CAGCAGGCGG GGTTCACCAT AGCAGAAGTC GCGGTGGCTT CGTTCGTGAT GGCGTTGGGC
ATTTCCTCCG CGCTGATCGC GATGCAGTGG GGTTTTCGAC ATCTGGACGT GGCCCGTGGC
AACACCCTCG CCTCGCAGAT CATGCAAAGC GAGATCGAGC GGTTGCGGTT ATTCCCGTGG
GAAAAGACCA CACCCACCGG CGTGGTGGAC AGCATCATCG AACTGCCCGC CTCGGAACCC
GTCAGCCTCG CCAGCATGTT TTCCTCGAGC GCGGCGCTCG CCGCCCGCTT CACCGTGACG
CGCACGGTGA CCGCGGATGC CGCGCGTGCG GATGTGCGCT ACGTCACGGT CACCGTGACG
TGGAACACCT CGGATGGGCA GAGCCATACG CGCTCGTCCA CTACGATGTA TGCGAAGAAT
GGTCTCTATG ACTACTACTA CACCCTCGCC GGCAGCTGA
|
|---|
| Protein sequence | MVSSILLAPS HKTRPQGPRR QQAGFTIAEV AVASFVMALG ISSALIAMQW GFRHLDVARG
NTLASQIMQS EIERLRLFPW EKTTPTGVVD SIIELPASEP VSLASMFSSS AALAARFTVT
RTVTADAARA DVRYVTVTVT WNTSDGQSHT RSSTTMYAKN GLYDYYYTLA GS
|
|---|
| |