| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_0620 |
|---|
| Symbol | |
|---|
| ID | 6207737 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | - |
|---|
| Start bp | 758878 |
|---|
| End bp | 760305 |
|---|
| Gene Length | 1428 bp |
|---|
| Protein Length | 475 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641690243 |
|---|
| Product | amino acid carrier protein |
|---|
| Protein accession | YP_001817510 |
|---|
| Protein GI | 182412444 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1115] Na+/alanine symporter |
|---|
| TIGRFAM ID | [TIGR00835] amino acid carrier protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGACCGCT TTGTCAATTT CCTCAACGAT CTGATCTGGA GTCCGGCGCT CATTGTCTTG
TGTCTGGGGG CCGGGCTCTA CTTTTCCGTC CGGACACGGT TCCTACAGGT GCGGCATGTG
CGTGATATGT TCAAACTGCT GTTTCGCAGC GAAGCGTCCG CGCGGGGCAT CTCTTCATAT
CAGGCGTTCG CGCTGGCGAT CTCCGGCCGG GTGGGCATCG GCAATATCGC CGGCGTGGCG
ACGGCGATCG CGATGGGCGG ACCGGGGGCG ATCTTCTGGA TGTGGGCGAT CGCGTTCCTT
GGCGCTGGCT CGGCCTTCGT GGAGGCGACG CTCGCGCAGA TCTACAAGGA GGAGATCAAC
GGGCAGTACC GCGGGGGGCC GGCGTACTAC ATCGAGCGCG GCTTGAAGGT GAAGTGGTAT
GCGGTCGTGT TCGCGGTTTC GACGACGGTG GCCACGGGCT TTTTCATGCC GGGTGTGCAG
TCCAACGCGA TCGGCGAGGC GATGCGCAAT GCGTTTGGTC TGCCGTTGCT CGCGAGCGCG
ATGATCGTCG CGGGGCTGAT CGCGTTGATC ATTTTCGGCG GGGTGAAACG GATCAGCCGG
GCGGCGGAGG CCTTCGTGCC GATCATGGCG GTCGGTTATG TGGGCATGGC GGTGGTCGTG
GTGGCGTTGC ATTGGCGCGA GGTGCCGGCG ATATTCGCGC TGATTTTCCG CAGTGCGTTC
GGGGCCGATG CGGCGTTTGG CGGCGTGGTC GGACTGGCGA TTTCCTGGGG CGTGAAGCGG
GGGATTTATT CGAACGAGGC CGGGCAGGGC AGCACGCCGA TGGCCGCGGC GGCCGCCGAG
GTCAAACACC CGGCCGTGCA GGGGCTCGTG CAGGCGTTTT CGGTGTACGT GGACACCTGG
CTCGTGTGCA GCTCGACGGC GTTCATGGTC TTGCTCACGG GCAAGTACAA CGTCGTGAAT
CCGGCGGGCG GTTTTCTGCG CGAGGGGCTG CCGGGAGAGA CGGCGGGGCC GGGCTACACG
CAGGCGGCGG TGGACACCGT GGTCTCGGGT TTCGGGAGCG CGTTCGTGGC GGTCGCGCTG
TTCTTTTTCG CGTTCACGAC GCTGATGGCG TACTACTACT ACGCGGAAAC GAACCTCGCG
TACCTGCGTC GCAGCAAGTC CAGCCCGAAA CTTTTTCTGG CGCTCCGGCT GGTGTTCGTA
GGCGTGACGT TCTACGGCAC ATTGCGGCAC GCGGACGTGG CGTGGGCGAT GGGCGACGTG
GGCGTCGGGC TGATGGCCTG GCTCAATCTG ATCGCGATCC TGCTGCTGGC GAAGCCGGCG
ATCGCGTGCC TGCGCGACTA CGAAGCGCAG CGCCGGGCCG GCGTCGCCGA GCCGAGCTAC
ATCGCGAAGA CCGCCGGCGT GGACAACGCG GAGCTGTGGC GTGATTGA
|
|---|
| Protein sequence | MDRFVNFLND LIWSPALIVL CLGAGLYFSV RTRFLQVRHV RDMFKLLFRS EASARGISSY
QAFALAISGR VGIGNIAGVA TAIAMGGPGA IFWMWAIAFL GAGSAFVEAT LAQIYKEEIN
GQYRGGPAYY IERGLKVKWY AVVFAVSTTV ATGFFMPGVQ SNAIGEAMRN AFGLPLLASA
MIVAGLIALI IFGGVKRISR AAEAFVPIMA VGYVGMAVVV VALHWREVPA IFALIFRSAF
GADAAFGGVV GLAISWGVKR GIYSNEAGQG STPMAAAAAE VKHPAVQGLV QAFSVYVDTW
LVCSSTAFMV LLTGKYNVVN PAGGFLREGL PGETAGPGYT QAAVDTVVSG FGSAFVAVAL
FFFAFTTLMA YYYYAETNLA YLRRSKSSPK LFLALRLVFV GVTFYGTLRH ADVAWAMGDV
GVGLMAWLNL IAILLLAKPA IACLRDYEAQ RRAGVAEPSY IAKTAGVDNA ELWRD
|
|---|
| |