Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_0599 |
Symbol | |
ID | 6204342 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | - |
Start bp | 726613 |
End bp | 728859 |
Gene Length | 2247 bp |
Protein Length | 748 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641690222 |
Product | TPR repeat-containing protein |
Protein accession | YP_001817489 |
Protein GI | 182412423 |
COG category | [R] General function prediction only |
COG ID | [COG0457] FOG: TPR repeat |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.709055 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGACT CCGCCTCATC GATCACCGCG GTTCGGCTCC GGTCCGTCGG TGGCCTGCTC GCCGCCAGCG GGGGCCTGAT CGTGCTGGCG CTGCTCGCGT ATGCGCCGGC GCTCCGCGGA GCAATGCTGT GGGACGATCC CGCCCACGTG ACCCGGCTCG GACTGCAGGG CTGGCACGGA CTGTGGCGGA TCTGGTTCGA GATCGGCGCG ACGCAGGAAT ACTACCCGGT CCTGCACACC GCGTTTTGGA TCGAGCACGC GCTCTGGGGT GAGTCGATGC TCGGCTATCA TCTGCTCAAC GTGCTGCTGC ACGTCGGCAA TGCGGTGCTC CTCGCGTTGT GCTTGCGCCG GCTCGGGTCA GATTCGGCGG CCGCGTGGCT GGCCGCGGCG CTGTTTGTAG TGCATCCGGT CTGTGTCGAG TCCGTCGCGT GGATCACCGA GCAGAAGAAC ACGCTCTCGA CGCTGTTCTA TTTGTTGTCG GCATTGGGCT ACCTCGAGTT CCAGCAGCGG CGGAGCGGTC CGGCGTATGC GTGGGCGTTC GGCTGTTTCC TGCTGGCGCT CGGAGCGAAA ACGATGACGG TCACGCTGCC CGCAGCGCTG CTCGTGCTGA GTTGGTGGCA ACACGGACGA CTCGCGTGGC GACGAGACGT GCTGCCGCTG CTGCCTTGGT TTGCGATGGC GCTCGCGGCG GGACTGCTGA CGCGTTCAGT CGAAGGCGAG TGGGTGGGGG CGAACCTCGT CGTGCCGGAT CTTTCGCTGC TGGAGCGCAC GTTGCTCGCC GCCCGCGTGC TTTGGTTTTC GCTCGGCCAG CTGCTCTGGC CGGCGGGCCT CACGTTTTTC TACCCGCTCT GGGACGTCGC GGCGGAGTCG CGCGGCTGGA GCCTTCACCT GTTGGCGGCG GTTGCGGTCA CGGCTGCGCT ATGGCTTTGG CGTCGGCGCT CCCGCGGTCC GCTCGCCTGG TGGCTCCTCT ACGCGGGGAC GCTTTTCCCG GTGCTCGGGT TTCTGAAGGT ATTCTCGTTC TCGTTCTCCT ACGTCGCGGA CCATTTTCAG TATCTCGCGA TTCCGATCGC GATGGCCGGT GTCGCCACCG CCGGAGTTGC GGTGATGCGC CGGGTGGCTG CGCGACCGCG CGCGTTGGCC CCGGCGCTGG CAGTCGGCGT CGTGCTCACG CTCGGGCTGC GGGCGCGCAA CCAGAGCCGG CTTTATCAGG ACAACGAAAC GCTGTTTCGA GCTAACATCG CGCACAACCC GCAGAGCTGG ATGGGGCATC ACATCCTGGC CGACACGGTG GCGCGAACGC CCGGCCGGCG CGTGGAAGCG ATCGCGCTCT TCCGGCGCGC GCTGGAGCTG AAGCCCGACA ACCCCGATTC GCTCGCCGCA CTCGCCGCCT TGCTCGTACG TGCGCCCGGC CACCGCGATG AAGCCATCGC GCTCTTTCGC CGTGCGGTGC AGTTGCGGCC AACCTTCGCG GAGGCGCACA ACGGCCTGGC GAACGAACTC GCCGCCACGC CGGACGGTTT GGCCGAAGCG GTCGAGCACT ACGGGACGGC GCTGCGATTG CGGCCAAAGT TCGCGCTCGC CCGCGCCAAC CTCGCGCAGG CGCTTGCGCG GATTCCCGGC CGCGCCGCGG AGGCGCTGGC TTGTTTCGAT GAGGTCTTGC GCGCGATGCC CGACTATGCG CCGGCGCACT TTCATCGCGG GAATCTGTTG GCGACCGTGC CGGGCCGGAT GGCGGAAGCG ATCCCCGACT ACGAAGCGGT GCTGCGCCAA CTGCCCGACG ATCCCGAGGC GCACCTCGCG CTTGGCCGCG TGCTCACCCA GCTGGGCCGC CCGGCGGACG CGCTGCCCCA CCTCGAGGCG GCGTTACGCG GGCAGCCGAA CTCGGCGATG GTTCATGCGC AGCTTGCGAA CGCGCTCGCG CTTCTACCCG GCCGGCTGAA CGAGGCGATT GTCCACGATG AAGCCGCGCT GCAGATCGAC CCGCGGCTCC CGTGGGTGCG GTTCAACTTC GCGCTGCATT TGCTGGAGAT CGCGGGCCGG ATCGAGGAGG CGCTGGCGCA GGTGCAACAG GCGCTTCGGC TCCAGCCCAA CTACCTCGAA GCGGAAAATC TACGGGGCAT CATTCACGCG CGGTTGGGCG ACGCAGCGGC GGCTCGCGCG GCATGGACTC GGGCGCTGGA ATTGGATCCG ACCTTTGCGC CCGCGCGGCA AAACCTGCAG TTGCTGTCAG GGAAGACGAC GCGCTGA
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Protein sequence | MNDSASSITA VRLRSVGGLL AASGGLIVLA LLAYAPALRG AMLWDDPAHV TRLGLQGWHG LWRIWFEIGA TQEYYPVLHT AFWIEHALWG ESMLGYHLLN VLLHVGNAVL LALCLRRLGS DSAAAWLAAA LFVVHPVCVE SVAWITEQKN TLSTLFYLLS ALGYLEFQQR RSGPAYAWAF GCFLLALGAK TMTVTLPAAL LVLSWWQHGR LAWRRDVLPL LPWFAMALAA GLLTRSVEGE WVGANLVVPD LSLLERTLLA ARVLWFSLGQ LLWPAGLTFF YPLWDVAAES RGWSLHLLAA VAVTAALWLW RRRSRGPLAW WLLYAGTLFP VLGFLKVFSF SFSYVADHFQ YLAIPIAMAG VATAGVAVMR RVAARPRALA PALAVGVVLT LGLRARNQSR LYQDNETLFR ANIAHNPQSW MGHHILADTV ARTPGRRVEA IALFRRALEL KPDNPDSLAA LAALLVRAPG HRDEAIALFR RAVQLRPTFA EAHNGLANEL AATPDGLAEA VEHYGTALRL RPKFALARAN LAQALARIPG RAAEALACFD EVLRAMPDYA PAHFHRGNLL ATVPGRMAEA IPDYEAVLRQ LPDDPEAHLA LGRVLTQLGR PADALPHLEA ALRGQPNSAM VHAQLANALA LLPGRLNEAI VHDEAALQID PRLPWVRFNF ALHLLEIAGR IEEALAQVQQ ALRLQPNYLE AENLRGIIHA RLGDAAAARA AWTRALELDP TFAPARQNLQ LLSGKTTR
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