Gene Oter_0599 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_0599 
Symbol 
ID6204342 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp726613 
End bp728859 
Gene Length2247 bp 
Protein Length748 aa 
Translation table11 
GC content68% 
IMG OID641690222 
ProductTPR repeat-containing protein 
Protein accessionYP_001817489 
Protein GI182412423 
COG category[R] General function prediction only 
COG ID[COG0457] FOG: TPR repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.709055 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGACT CCGCCTCATC GATCACCGCG GTTCGGCTCC GGTCCGTCGG TGGCCTGCTC 
GCCGCCAGCG GGGGCCTGAT CGTGCTGGCG CTGCTCGCGT ATGCGCCGGC GCTCCGCGGA
GCAATGCTGT GGGACGATCC CGCCCACGTG ACCCGGCTCG GACTGCAGGG CTGGCACGGA
CTGTGGCGGA TCTGGTTCGA GATCGGCGCG ACGCAGGAAT ACTACCCGGT CCTGCACACC
GCGTTTTGGA TCGAGCACGC GCTCTGGGGT GAGTCGATGC TCGGCTATCA TCTGCTCAAC
GTGCTGCTGC ACGTCGGCAA TGCGGTGCTC CTCGCGTTGT GCTTGCGCCG GCTCGGGTCA
GATTCGGCGG CCGCGTGGCT GGCCGCGGCG CTGTTTGTAG TGCATCCGGT CTGTGTCGAG
TCCGTCGCGT GGATCACCGA GCAGAAGAAC ACGCTCTCGA CGCTGTTCTA TTTGTTGTCG
GCATTGGGCT ACCTCGAGTT CCAGCAGCGG CGGAGCGGTC CGGCGTATGC GTGGGCGTTC
GGCTGTTTCC TGCTGGCGCT CGGAGCGAAA ACGATGACGG TCACGCTGCC CGCAGCGCTG
CTCGTGCTGA GTTGGTGGCA ACACGGACGA CTCGCGTGGC GACGAGACGT GCTGCCGCTG
CTGCCTTGGT TTGCGATGGC GCTCGCGGCG GGACTGCTGA CGCGTTCAGT CGAAGGCGAG
TGGGTGGGGG CGAACCTCGT CGTGCCGGAT CTTTCGCTGC TGGAGCGCAC GTTGCTCGCC
GCCCGCGTGC TTTGGTTTTC GCTCGGCCAG CTGCTCTGGC CGGCGGGCCT CACGTTTTTC
TACCCGCTCT GGGACGTCGC GGCGGAGTCG CGCGGCTGGA GCCTTCACCT GTTGGCGGCG
GTTGCGGTCA CGGCTGCGCT ATGGCTTTGG CGTCGGCGCT CCCGCGGTCC GCTCGCCTGG
TGGCTCCTCT ACGCGGGGAC GCTTTTCCCG GTGCTCGGGT TTCTGAAGGT ATTCTCGTTC
TCGTTCTCCT ACGTCGCGGA CCATTTTCAG TATCTCGCGA TTCCGATCGC GATGGCCGGT
GTCGCCACCG CCGGAGTTGC GGTGATGCGC CGGGTGGCTG CGCGACCGCG CGCGTTGGCC
CCGGCGCTGG CAGTCGGCGT CGTGCTCACG CTCGGGCTGC GGGCGCGCAA CCAGAGCCGG
CTTTATCAGG ACAACGAAAC GCTGTTTCGA GCTAACATCG CGCACAACCC GCAGAGCTGG
ATGGGGCATC ACATCCTGGC CGACACGGTG GCGCGAACGC CCGGCCGGCG CGTGGAAGCG
ATCGCGCTCT TCCGGCGCGC GCTGGAGCTG AAGCCCGACA ACCCCGATTC GCTCGCCGCA
CTCGCCGCCT TGCTCGTACG TGCGCCCGGC CACCGCGATG AAGCCATCGC GCTCTTTCGC
CGTGCGGTGC AGTTGCGGCC AACCTTCGCG GAGGCGCACA ACGGCCTGGC GAACGAACTC
GCCGCCACGC CGGACGGTTT GGCCGAAGCG GTCGAGCACT ACGGGACGGC GCTGCGATTG
CGGCCAAAGT TCGCGCTCGC CCGCGCCAAC CTCGCGCAGG CGCTTGCGCG GATTCCCGGC
CGCGCCGCGG AGGCGCTGGC TTGTTTCGAT GAGGTCTTGC GCGCGATGCC CGACTATGCG
CCGGCGCACT TTCATCGCGG GAATCTGTTG GCGACCGTGC CGGGCCGGAT GGCGGAAGCG
ATCCCCGACT ACGAAGCGGT GCTGCGCCAA CTGCCCGACG ATCCCGAGGC GCACCTCGCG
CTTGGCCGCG TGCTCACCCA GCTGGGCCGC CCGGCGGACG CGCTGCCCCA CCTCGAGGCG
GCGTTACGCG GGCAGCCGAA CTCGGCGATG GTTCATGCGC AGCTTGCGAA CGCGCTCGCG
CTTCTACCCG GCCGGCTGAA CGAGGCGATT GTCCACGATG AAGCCGCGCT GCAGATCGAC
CCGCGGCTCC CGTGGGTGCG GTTCAACTTC GCGCTGCATT TGCTGGAGAT CGCGGGCCGG
ATCGAGGAGG CGCTGGCGCA GGTGCAACAG GCGCTTCGGC TCCAGCCCAA CTACCTCGAA
GCGGAAAATC TACGGGGCAT CATTCACGCG CGGTTGGGCG ACGCAGCGGC GGCTCGCGCG
GCATGGACTC GGGCGCTGGA ATTGGATCCG ACCTTTGCGC CCGCGCGGCA AAACCTGCAG
TTGCTGTCAG GGAAGACGAC GCGCTGA
 
Protein sequence
MNDSASSITA VRLRSVGGLL AASGGLIVLA LLAYAPALRG AMLWDDPAHV TRLGLQGWHG 
LWRIWFEIGA TQEYYPVLHT AFWIEHALWG ESMLGYHLLN VLLHVGNAVL LALCLRRLGS
DSAAAWLAAA LFVVHPVCVE SVAWITEQKN TLSTLFYLLS ALGYLEFQQR RSGPAYAWAF
GCFLLALGAK TMTVTLPAAL LVLSWWQHGR LAWRRDVLPL LPWFAMALAA GLLTRSVEGE
WVGANLVVPD LSLLERTLLA ARVLWFSLGQ LLWPAGLTFF YPLWDVAAES RGWSLHLLAA
VAVTAALWLW RRRSRGPLAW WLLYAGTLFP VLGFLKVFSF SFSYVADHFQ YLAIPIAMAG
VATAGVAVMR RVAARPRALA PALAVGVVLT LGLRARNQSR LYQDNETLFR ANIAHNPQSW
MGHHILADTV ARTPGRRVEA IALFRRALEL KPDNPDSLAA LAALLVRAPG HRDEAIALFR
RAVQLRPTFA EAHNGLANEL AATPDGLAEA VEHYGTALRL RPKFALARAN LAQALARIPG
RAAEALACFD EVLRAMPDYA PAHFHRGNLL ATVPGRMAEA IPDYEAVLRQ LPDDPEAHLA
LGRVLTQLGR PADALPHLEA ALRGQPNSAM VHAQLANALA LLPGRLNEAI VHDEAALQID
PRLPWVRFNF ALHLLEIAGR IEEALAQVQQ ALRLQPNYLE AENLRGIIHA RLGDAAAARA
AWTRALELDP TFAPARQNLQ LLSGKTTR