Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_0580 |
Symbol | |
ID | 6208312 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | + |
Start bp | 697631 |
End bp | 698434 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641690202 |
Product | anti-ECFsigma factor, ChrR |
Protein accession | YP_001817470 |
Protein GI | 182412404 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACTGCG ACCGCGCTCA GGAACGCTTT AACGAACTGC TCGACCACCG GCTCGACGAA GCCACCACGG CCGAGGTTCG CGAGCACCTC GCCTCGTGCC CCGATTGCCA GCGCGAATAC TCCTCGCTCG CGCAGACGCT CGCCGCCCTC GACCAGCTCC CCGCCGCCAA GCCCGGTCCG CGGCTTCGCA CCCACTTCTA CGCGATGCTC GAAGAAGAAA AAAACTCCGC CGCCAGCATC CGCGCCGCCG TGGTCCGCCG GCAGCACGCG CAGCGGATGA CGCTCTGGCG CTGGATCCTC TCGCCGGTCG CCGTCGCCGC CATCGCACTC GCTGGTTTTC ATTTCGGCAC GCGCGTGGGC GGCACCGATG ACGGCACCAA ACAGCAGCTG GCCGAAATGA AGACGAAGCT CGAATCGATC GACCAGCTCG TCGGCATCTC GCTCCTGCAA CAGCGCTCGA CGAGCGAACG GCTGCAGACC GTCCTCGCGA CCCTCGACCA GAAGAATCCC GACCCGAAGA TCATCTCCAA CTTGATCGGT GCGCTGGCGC TCGATCCGAG CGTCAACGTC CGGCTCTCCG CGCTCGACGC GCTCTACCCA CACGCCAACC AGCAGGTTGT CCGCAGCGGC GTGCTCGCCT CGCTCCCACG TGAGCAGAAC CCGCTGGTGC AGGTGGCGAT GATCGACTTT CTCGTCGCCG CTCGCGACCG CGATGCCACG CCCGAGCTCG AGAAGCTCGC CCGCAACGAA ACGATCGACA AGGCCGTACG CGACGCAGCG AAACGCGGCC TCGCGCAACT CTGA
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Protein sequence | MNCDRAQERF NELLDHRLDE ATTAEVREHL ASCPDCQREY SSLAQTLAAL DQLPAAKPGP RLRTHFYAML EEEKNSAASI RAAVVRRQHA QRMTLWRWIL SPVAVAAIAL AGFHFGTRVG GTDDGTKQQL AEMKTKLESI DQLVGISLLQ QRSTSERLQT VLATLDQKNP DPKIISNLIG ALALDPSVNV RLSALDALYP HANQQVVRSG VLASLPREQN PLVQVAMIDF LVAARDRDAT PELEKLARNE TIDKAVRDAA KRGLAQL
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