| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_0578 |
|---|
| Symbol | |
|---|
| ID | 6208524 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | - |
|---|
| Start bp | 695689 |
|---|
| End bp | 696630 |
|---|
| Gene Length | 942 bp |
|---|
| Protein Length | 313 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641690200 |
|---|
| Product | beta-lactamase domain-containing protein |
|---|
| Protein accession | YP_001817468 |
|---|
| Protein GI | 182412402 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCGCC GCGACTTTCT CGTTCGTTCT TCGTTGCTGG TTTCCGCGGG GCTGTTGTTC
CCGCGTTCTC TGGTGCGCGC CCAAGCGCCG GTCGGATCCG CCAAAGCCGC GCCTGTGCCA
GCCGCCACCG AGTTTCGCCC GCTGCGGCGC GGCGTGGGAC TGTTCACCGG GCGGGGTGGC
ACGATCGGTT GGCTGTCCAA CCAGGACGCG CTGGCGGTCG TGGACACACA GTTTCCTGAC
ACCGCCGCGA TCTGCCTGGC GGGACTGCCG GAGCGTGGCA GCCGATTGAT CGATGTCGTG
ATCAACACGC ACCACCACGG CGACCACACG GGCGGCAATG GCGTGTTCAA GGCGGCGGCG
AAGACGATCG TCGCGCACCA GAATGTCCCG AAGCTGCAGA TGGCCCGCGC GGAAAAGGAC
GGCACCGTCG ACAAGCAGGT GTTTGCCGAC ACGACGTTTG TCGAGGCGTG GCGGCACGAT
CTCGGCGACG AGACGGTGAC CGCACAGTAT TTCGGGCCGG CGCACACGAG CGGCGACATC
GTCGTGCACT TCGAGCGCGC CAATGTCGTG CACTTAGGCG ACCTGATGTT CAACCGGCTC
TATCCCGTCA TTGACCGGCC GGGCGGCGCG AGCATTCGCG GTTGGATCCA GAGGTTGGAG
GAGGTGGTGA AGACCTATCC GGCGGATGCG ATTTACATCT TCGGCCACGG CAACGCGAAA
TTCGGCGTGA CTGGTGGGCC GGCGGATCTG AACGGTTTCC GCGATTATCT GAGCGCGCTG
CTCACGCACG TGGAGAAGCA GATCGCCGCG GGCCGGAGCA AGGACGAGAT CGTCGCGCTC
GAGAACTTCC CGGGCTTCCC GGACTACCAT CAACCGCGGC CGAACCGACT TACGGCGAAC
CTCGGCGTCG CTTACGACGA GCTGACGGAG AAGCGCAGCT GA
|
|---|
| Protein sequence | MNRRDFLVRS SLLVSAGLLF PRSLVRAQAP VGSAKAAPVP AATEFRPLRR GVGLFTGRGG
TIGWLSNQDA LAVVDTQFPD TAAICLAGLP ERGSRLIDVV INTHHHGDHT GGNGVFKAAA
KTIVAHQNVP KLQMARAEKD GTVDKQVFAD TTFVEAWRHD LGDETVTAQY FGPAHTSGDI
VVHFERANVV HLGDLMFNRL YPVIDRPGGA SIRGWIQRLE EVVKTYPADA IYIFGHGNAK
FGVTGGPADL NGFRDYLSAL LTHVEKQIAA GRSKDEIVAL ENFPGFPDYH QPRPNRLTAN
LGVAYDELTE KRS
|
|---|
| |