Gene Oter_0552 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_0552 
Symbol 
ID6207693 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp663453 
End bp666467 
Gene Length3015 bp 
Protein Length1004 aa 
Translation table11 
GC content53% 
IMG OID641690174 
Productsignal transduction protein 
Protein accessionYP_001817442 
Protein GI182412376 
COG category[T] Signal transduction mechanisms 
COG ID[COG5635] Predicted NTPase (NACHT family) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGCATCG ATGAATGGGC ACGCGTGGCA GTGCGGTCCG CCGGGCACGC AAAAGCCGCA 
TCTGTCATTG GCCCTCGAAT CTCCCGGCGC TCGGTCTCAC GCCTTGACCT TAACTCTACC
TGCGTCGTAT TTGCTCGTCG CCGACTATTG TCAGCACCTA GTCGTGGCAA ATATACGCAC
AAGATGCCTC GTCGGCGTCG GCATCGTACT GCCGCGGATG ACCAGTTCAA CCCCACCGAT
TGCATGAGCA CCGTTTCCCA AGGCAAAGCC TTTGAACTGG ATGTTGTCCA GCTATTGGAA
CTCAAAGGGT ATAAGGTTAC GCGAAACAAC CTGATCAACG GCACCCAGAT CGACATCGTA
GCCAGTCGAA ACGATCTGTT GGAAAACACC ACGTTAGTCG TCGAATGCAC GGACCGCGAT
GCCGCCGTGG GCGTCGACCT CGTGAAAGAA AAGTCCGCAG TGCTCCTTTC GCTTCGCGGA
GGTAAATCGC ATTTTCGACT GATGTTTGTT GCGCGAAATG GTTTTTCCGC GGAGGCGAAA
ACTTTTGCGG ATTCTCAGCC CGACACTCTC CTGCTTACGT TCGCTCAACT CGAAAACCTC
CTGGTTGATT TCACGCCTTA CGTGAACTGG TACCGAAGCC ACTACGAGCG ATCTCTAGGT
GTTTTCAAAG ACGCGAAGTT GATTGATCGT TACGTCGATC TGAGTGGAAG GGATGAGAAA
GGCCAGTTGA TCGCATCGCT TGACAGTTTC GCCCGCGAAT GGCTCGCGAA CGAAAAGAAC
AACCTACTTT TCCTTTTGGG AGACTATGGT GCTGGTAAGA CGTCATTTTC CCGGCAGTTT
GCGTATCGCC TCCTCCGCGA GAAATTTGAC GAGCACGGCA CCGGGCGATA CACGCCGCTT
CTTATCAGTC TGCGCGACTC TCACGGGCAG CTTGACCTAA AACGCCTTCT TCTCGAGTCG
CTGACAAATC TCTACGGCGT GGAATTGCAG TCGTTCATGG CCTTCGAGCG ACTCTGCGCC
ACCGGACGCG TCCTCGTACT CCTCGACGGT TTCGATGAGA TGACGGAACG ATCAGACTTC
AAGACGATCA CGGACGCATT TCAGCAAATT TACCTCTTTG CAGCTCTGGA TGCTAAAATC
ATCCTGACCT GCCGTTCTAA TTTTTTCCGC AGTCACGCCG ATGTCATCGA ACTGCTTCGG
CAATTCTCAA TTTCAGTCCC GACAAAGAGC GACGGGCGTT CGTTGGAGTT GCCACTCAAA
GACCAAGGCA AGCTGGTCTA CGTCGAGAAG CTAAATGATG CGCAGATTCG CGCTTTTATC
GCCAAGAGAT TCGGAGGTCA AAGCGACGAG ATACTAGCAT CGATTCGACG AATTCACGAT
CTATCAGATC TTTGCACGCG CCCAGTCCTG CTAGACATGA TTCTGTCGAC TTTGCCGGAA
TTGGAACGAC TTAAGAGAAA GATCAATTCC GCGGCGCTTT ATCAGCATTA CACCGATCGC
TGGACAATGC GCGACCAATG GCGGGTCACC ATTCCACTCA AGGTTCGAAC CATTTTTTGC
GAATCGCTTG CTTGGTTGAT GCATTGTGCG AACGCGACTG CCATTTCATC AGCCACCTTG
GAGACCACCA TGGTTGCTGC TTTAGGACCT ATAGCCGGGA AAAATAGAGA CGACCTTGCG
AAGTTTCAAA ACGATATCCA GACGTGCTCG TTTCTCGTAC GCGTCGGAGA AAAAGACGAA
TTCCGGTTTG CGCACAAGTC GTTCAGCGAG TTCTTCGTTG CTCGTAAGCT GGTGGCTGAC
CTTATGGCTG GAACCGAGGT ACAGCGGGCT GATACCACAG GAGTCTCCGC ATCACCTAGT
CACGTCGTAG AGAAGAAGAG GACGGGAACT CACCAGCCTA CCGAAAAGCG TCCCGACATC
CTCCGGGTAA ACGTCACGGA CTTCGTCATC GATGCTCCCG TCACGCTGAC GTTCAATAGT
GGAGGCGGCA AATATTCTCT ATTCGAAAAC ATTCGCGCTT CTCTTAACGA TCGGCTCCGC
TCGACCGATT TCTTCCAGGC CATGCATGTG CAGGAGCTTT CACATCAATG GCCGTACATT
TCGTCAGACA CTGCCGTTCG CTCCCATTTG GAGGCAGAGA TCCGTGCAAT TTTCGCAAAA
CAATGGCGGA GCTCGCTTCC TGAAGATATT ACAATCTCCG AAGAGATCGC AACGTTCGCG
CTAGAGCACA TGGGCGCTAA GCCCGACGCG TTTGCCGTTA TAGTAGCAAA ACTTAGAACG
GCCCGCAGTA TTGATGTATT TTCCGATTTG GTTCGGCTCT CAAAGAGCGC GGATTGGGTG
CAGCAAAACG CGAGCGCACT CCGGGACTAT GTCAGGAATG GTAAGTACGA GCAGCTGAAG
ACTGCCGCTG CCGCTGCGCT AGCCAGGCAC CCTGAGCCAC TGACGCTGGA ATTTGTAAGA
GAGATCAAAA CGTCACTCCC CGAAGGAGGC TGGAGTTACT TTTTGTTTCA GCTAGCCGAG
GATGGTCCGC GCTATGCCGA CGTCCTTGGA GCCTTGTCGC TAGACGAGAC CATCGCGCCG
GTCGATCGGG TAATCTGCTT GTATGGGCTC GGCGGGCAAT TGCCTTCCGA CAAGAATCAC
GAACGGCTCG CTCGACTAGT TGTTCAGTTG CTGCGCTCAA AGCAGTCCAG CGAGCAACGC
CTAGCCACCC GCGTTTTTAG CACATTCACA CCCGAACAGC GCCTCGCAAT CTTGGCTGAA
GGGTTCAAAG ATCCAGATCC TGGCTTGCGC AAGATTCTAC TTGCTCTCAC GAATGCCGAA
CTGGAGGGGA TTGACTGGCG TCGAATTCGA GCGCTCGCGG TCGCGGAGCA AAACGCTGAG
ATTCGGAAAG AAATATATGC GCTTGAGGAA ACAATCCGCA ATTTCGAGAG CGAGAGACAG
AATCGCGCCA GTTGGGACCG TTCCAAAAAT TCACGCAATC TACGCGAGTC ACTTTGGCAA
TCACGGTTGA GGTGA
 
Protein sequence
MGIDEWARVA VRSAGHAKAA SVIGPRISRR SVSRLDLNST CVVFARRRLL SAPSRGKYTH 
KMPRRRRHRT AADDQFNPTD CMSTVSQGKA FELDVVQLLE LKGYKVTRNN LINGTQIDIV
ASRNDLLENT TLVVECTDRD AAVGVDLVKE KSAVLLSLRG GKSHFRLMFV ARNGFSAEAK
TFADSQPDTL LLTFAQLENL LVDFTPYVNW YRSHYERSLG VFKDAKLIDR YVDLSGRDEK
GQLIASLDSF AREWLANEKN NLLFLLGDYG AGKTSFSRQF AYRLLREKFD EHGTGRYTPL
LISLRDSHGQ LDLKRLLLES LTNLYGVELQ SFMAFERLCA TGRVLVLLDG FDEMTERSDF
KTITDAFQQI YLFAALDAKI ILTCRSNFFR SHADVIELLR QFSISVPTKS DGRSLELPLK
DQGKLVYVEK LNDAQIRAFI AKRFGGQSDE ILASIRRIHD LSDLCTRPVL LDMILSTLPE
LERLKRKINS AALYQHYTDR WTMRDQWRVT IPLKVRTIFC ESLAWLMHCA NATAISSATL
ETTMVAALGP IAGKNRDDLA KFQNDIQTCS FLVRVGEKDE FRFAHKSFSE FFVARKLVAD
LMAGTEVQRA DTTGVSASPS HVVEKKRTGT HQPTEKRPDI LRVNVTDFVI DAPVTLTFNS
GGGKYSLFEN IRASLNDRLR STDFFQAMHV QELSHQWPYI SSDTAVRSHL EAEIRAIFAK
QWRSSLPEDI TISEEIATFA LEHMGAKPDA FAVIVAKLRT ARSIDVFSDL VRLSKSADWV
QQNASALRDY VRNGKYEQLK TAAAAALARH PEPLTLEFVR EIKTSLPEGG WSYFLFQLAE
DGPRYADVLG ALSLDETIAP VDRVICLYGL GGQLPSDKNH ERLARLVVQL LRSKQSSEQR
LATRVFSTFT PEQRLAILAE GFKDPDPGLR KILLALTNAE LEGIDWRRIR ALAVAEQNAE
IRKEIYALEE TIRNFESERQ NRASWDRSKN SRNLRESLWQ SRLR