Gene Oter_0542 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_0542 
Symbol 
ID6204338 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp646897 
End bp648264 
Gene Length1368 bp 
Protein Length455 aa 
Translation table11 
GC content60% 
IMG OID641690164 
Producthypothetical protein 
Protein accessionYP_001817432 
Protein GI182412366 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAATC AGAAGGAAGC TCCCAATTCC TCCATTTTGC CTGATATTCC GCGGCGCTCG 
CTGCTGATCA GCCCCGCCCC AATAGGGCTG GGGTCGGTAG CCGCTGAATC CCTATTTAGC
TATTTTTGCC GTGTCGCTCT GCAGAACAGT TTTTCGCCGG GTCATCTGGT GTTCGGTCCA
TTTACGGCGC TGGCTACACA AGAGCGTGAT GGCGGATTGG TGTTCCGGCG GACGGCTCGG
GCCTCACTCG CCCGCCGAAC TGTGAGCGTC TCCGAGATCG GCTATCAGTT CGCCACACGG
CTCGCGAGTT TGGTCGGCAG GCCGGAGGTT ATGAGGATGC ATTGGCGCCA CACCCTGAGT
GGCTACTCGT TTGCGCGCAT GACGCGAGGC TTCGCCGCAT ATTGTCCTAA GTGCTTAGGT
TCAGATCTAG AGCCACATGA GCACATCGCA TGGGAGTTGG CGCTTTTTGG TGCCTGCGTG
CGGCATCAGT GCGTTTTGGT GTCCCGTTGT GGTCGCTGCG GTCGCCGGGC GAGTCGGCTG
AGTCTCAAAG GCAAGCCTTG GGAATGCCCC TTGTGCGGGC ACGATCGCCG TCTAGATCAT
GCTCGGTCGG CAGGGCATGC GGAAATCGCC GCCGCCGAGG AACTCGGCGC CCTGGTGGCC
GAAGCTACCG CCGCCAAACC TGCCGGCTAC CTTGCCGCCC GAGATTGTGT CGAACGGCTT
ATGGGATGGG CGGACACGCA CGGGGCGCGA TCGGTCAAGC AGGTAGCGAA ATACTTCGCC
ATTTCGGTTG GTACCGCATC GCTGTGGCGC AGCAAACGAA TCCGACCCTC GGCATCCCGG
CTAGTTGAAC TGGGCCTCCG GAACGGCCTG CCACTACCGG CGCTATATCG GGGAGATTTC
AGCGCGGTTC GCCCTGCGCC GACGACGCGA GGACTTGCCC TTATCTGGAA GAGGCGGCGC
CTAACAGGCG CCGAACGCTC GATCATCACG ATCAGGACGG AAGCTCTGGC CACTCTGAAC
CCAATGCGAC CCGTGCCCGA GGTCGCGGCC GAGCTCAACA TTTCGCCACG AACCCTTCGG
CAGATCGCTC CTGAGCTATG CTCTCAGATG AAGGCTAACT ACGCCGCCAA TCGGCGCCGG
ATCAAAGAGA GAAAAATGGA GTGGTTCTGC CGTAAGGTTG AGAGCTATGT GGCGGCCTGT
TTCCTCAATC GACAGCCGCC CACCTGGCAG GGGTTTTCGC TCGTTTTTCA AAAACCGGGG
ATCCTCCGTA ACGAGGTCCG GCGGCGTTAC GCAAAACGAG CAATTCGGCG AGCCCAGGAA
CTGCTGCCCG GTGTGCCGGA GCAAATGCTT CTGGATATTT CCGTTTAA
 
Protein sequence
MSNQKEAPNS SILPDIPRRS LLISPAPIGL GSVAAESLFS YFCRVALQNS FSPGHLVFGP 
FTALATQERD GGLVFRRTAR ASLARRTVSV SEIGYQFATR LASLVGRPEV MRMHWRHTLS
GYSFARMTRG FAAYCPKCLG SDLEPHEHIA WELALFGACV RHQCVLVSRC GRCGRRASRL
SLKGKPWECP LCGHDRRLDH ARSAGHAEIA AAEELGALVA EATAAKPAGY LAARDCVERL
MGWADTHGAR SVKQVAKYFA ISVGTASLWR SKRIRPSASR LVELGLRNGL PLPALYRGDF
SAVRPAPTTR GLALIWKRRR LTGAERSIIT IRTEALATLN PMRPVPEVAA ELNISPRTLR
QIAPELCSQM KANYAANRRR IKERKMEWFC RKVESYVAAC FLNRQPPTWQ GFSLVFQKPG
ILRNEVRRRY AKRAIRRAQE LLPGVPEQML LDISV