| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_0508 |
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| Symbol | |
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| ID | 6206021 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 603183 |
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| End bp | 604274 |
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| Gene Length | 1092 bp |
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| Protein Length | 363 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641690130 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001817398 |
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| Protein GI | 182412332 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACAT TGGAATCTCT TCAGCGCCTG CGCTTGCGAG CTCGGCTCCG CCACGGCGCG
CCGCTTGGCG TGCTGTGCGC CGGCTTGCTG GCGGTCGCCG GTTGCGGTCG GGCGCCAGAT
GCAGCGAAAC CGGAGCCGCC GCCGATGGTG GTGGCGCTGG CGCCGGTCGA GTATTCCGAC
GCCGCGGTGC CCGTGCGCGT ACCCGGTGTG CTTTCGCGAC AGGAGGAACC CGAGCTTGCC
TTCAAAATCG GCGGCGTGGT GGAGGAGGTG CTCGTGCGCA CCGGCGAAGC GGTGAAGAAG
GATCAAGTGC TCGCGCGGCT TCGGCTCGAC GAAATCGAGG CGCAGCTCAC GCAGGCGCGT
AGCGCGCTGG CGAAGGCGGA ACGCGACTTC GCCCGCGTCG AGCGACTGCA GGCCAACGCG
GTCGCGACGC TCGAGGATCT GCAGGACGCG CGAACCGGAG TGGATGTGGC GGCAGCACAG
ATGCGGATCG CGGAATTTAA TCGGCGGTAC GCCGTGATCA CTGCGCCGGC GGACGGGCAG
ATCCTGCGTC GGCTGGTCGA GCCCAACGAA ATCGTGGCGC CGGGTAAGGC CGTGCTCGGA
TTCGCCGCGG ACGACTCGGG TTGGCTCGTG CGCGCGGGTG TGGCGGACGC CGATCTCGCA
CGGTTGCAGC CCGGCGATCG CGCGGAGGTC ACGCTCAGCC ACGCCGCGGA GATGACGCTG
CCCGGCGCGA TCACGCGCAT CGCGGGCGCG GCGAATTCCA GCACCCGCAC GACCGAGGTG
GAGATTCTCC TCGCGCAGCC GCCCACTGCA GCGCGGTCGG GCGTGGCCGT TGCCGTCACG
CTTTGGCCGC GGCCCGTCAC ACCGCGGCCG GTCGTGCCGG CGTCGGTGTT GATCGAAGGC
GAAGGTGGCG TGGCGAGTGT GTTTGTGGTG AGGTCCGGTC AAGACGTCGC GCTTCGGCAG
AAGGTCGAGG TGGAAGCACT CGACGGCGCC AAGGCGTATC TGCGGACGGC GTTGTCACCC
GATCTCCGAC TCGTGGTGCG GGGCGGTGAA TATCTGCGCG ACGGCAGCCG GGTGGCGGAG
GCGCCAAAGT GA
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| Protein sequence | MKTLESLQRL RLRARLRHGA PLGVLCAGLL AVAGCGRAPD AAKPEPPPMV VALAPVEYSD
AAVPVRVPGV LSRQEEPELA FKIGGVVEEV LVRTGEAVKK DQVLARLRLD EIEAQLTQAR
SALAKAERDF ARVERLQANA VATLEDLQDA RTGVDVAAAQ MRIAEFNRRY AVITAPADGQ
ILRRLVEPNE IVAPGKAVLG FAADDSGWLV RAGVADADLA RLQPGDRAEV TLSHAAEMTL
PGAITRIAGA ANSSTRTTEV EILLAQPPTA ARSGVAVAVT LWPRPVTPRP VVPASVLIEG
EGGVASVFVV RSGQDVALRQ KVEVEALDGA KAYLRTALSP DLRLVVRGGE YLRDGSRVAE
APK
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