| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_0506 |
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| Symbol | |
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| ID | 6204362 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 598900 |
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| End bp | 599955 |
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| Gene Length | 1056 bp |
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| Protein Length | 351 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641690128 |
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| Product | phospho-2-dehydro-3-deoxyheptonate aldolase |
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| Protein accession | YP_001817396 |
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| Protein GI | 182412330 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0722] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase |
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| TIGRFAM ID | [TIGR00034] phospho-2-dehydro-3-deoxyheptonate aldolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.546525 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.829616 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCGAA CCTCGGACAT CAACATCATC GAGACACGCG CCTTGCCCTC GCCGGCCGCG
CTGCTCGCCG AGTTGCCCAA AACCGAAACG CAGGCCGATT TCGTCACCCG CGCCCGACAC
GAGATCAACC AGCTGATCTT CACCGCCGAC AAACGGTTCC TCTTCGTCGT CGGCCCATGC
TCGATCCACG ATCTGGACGC CGGCCGGGAG TATGCCCGCC GGCTCGCCGC CCTCGCCCGC
CAAGTCGCCG ACCGCGTCAC GATCGCCATG CGGGTCTATT TCGAAAAACC CCGCACCACC
GTCGGCTGGA AGGGGTTGAT CATGGACCCG CACCTCGACG GTTCCCACGA CATCGCCGCC
GGACTCCGAC TCGCGCGCGC GTTCCTGCGT GACGTGTTGG ACCTCGGCCT GCCGACCGCC
ACGGAACTGC TCGATCCGAT CACGCCTCAA TACATTGCCG ACTTGGTCTG CTGGTCCGCG
ATCGGCGCGC GCACGACCGA ATCGCAGACG CATCGGCAAA TGGCCTCGGG CCTTTCGATG
CCGCTCGGGT TCAAGAATGG CACCGACGGC TCGATCGGCA GCGCGATCAA CGCCATCCGG
GCCGCGGCCC AGCCCCAGAC CTTCCTCGGC ATCAACGTCG AGGGTGCCGC ATCCGCGCTC
GTCACCCGCG GCAATCCACA TTGTCACATC GTCTTGCGCG GCGGCTCAGC GGGGCCGAAC
TACGCGCCGG AGCACATCGC CCGCACGGAA CAGCTGCTCG CGAAGGCCGG ACTGCCCAAA
TCCATTCTCG TCGATTGTTC GCACGACAAC TCAGCCAAGC AGCCCGAGCG GCAGCCGGAG
GTGCTGCGCG CCGTGCTCGC CCAGATCGTG GCTGGCAACA CGTCGCTCAT GGGTGCGATG
ATCGAAAGCA ATCTTGCCGC GGGCAACCAG CCGTTCCCGC AGCCCAAGGA TCAGCTGCGC
TACGGCGTCT CGATTACCGA CGGCTGCATC GATTGGTCCG CCACCGAGGC ACTCGTCCAC
GAGATCCACG CCGCGCTCGC GCCGCGTTTC GCCTGA
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| Protein sequence | MQRTSDINII ETRALPSPAA LLAELPKTET QADFVTRARH EINQLIFTAD KRFLFVVGPC
SIHDLDAGRE YARRLAALAR QVADRVTIAM RVYFEKPRTT VGWKGLIMDP HLDGSHDIAA
GLRLARAFLR DVLDLGLPTA TELLDPITPQ YIADLVCWSA IGARTTESQT HRQMASGLSM
PLGFKNGTDG SIGSAINAIR AAAQPQTFLG INVEGAASAL VTRGNPHCHI VLRGGSAGPN
YAPEHIARTE QLLAKAGLPK SILVDCSHDN SAKQPERQPE VLRAVLAQIV AGNTSLMGAM
IESNLAAGNQ PFPQPKDQLR YGVSITDGCI DWSATEALVH EIHAALAPRF A
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