| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_0484 |
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| Symbol | |
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| ID | 6206547 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 570340 |
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| End bp | 570969 |
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| Gene Length | 630 bp |
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| Protein Length | 209 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641690106 |
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| Product | NADH (or F420H2) dehydrogenase, subunit C |
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| Protein accession | YP_001817374 |
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| Protein GI | 182412308 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0852] NADH:ubiquinone oxidoreductase 27 kD subunit |
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| TIGRFAM ID | [TIGR01961] NADH (or F420H2) dehydrogenase, subunit C |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.125364 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCGCGA CCATTGCTGC CGCCGCGCTG AAGCAAAAGT TCCCCGCTGT GACCGACCGT
GCGAGCGCGG ATCACCCGGC CGTGAACGTG GCGGTGACCG AACTGGTCGC GGCGCTGAAA
ACGCTGCGCG ACGAGCACGG TTACGACGTG TTGATGGACG TCACCGCGAT CGACTGGTCC
GAGACCAGCT CGCCCCGGTT CACCGTCGTC TATCACGTCT ACTCGACGAC GCATCACGAC
TATGTGCGCG TGGCGGCGGA CTGCGCCGAC GATGTTGCTC CCGTGGCGCC GAGCATCGTG
AGCCTCTGGC CGGCGGCCAA CTGGCACGAG CGCGAATGCT ACGACATGTT CGGGATCAAG
TTCGAGGGGC ATCCCGATCT GCGCCGCATC CTGATGTGGG AGGGGTATCC CGGCTGGCCC
TTGCGCAAGG AGTTCCCCTT GGCGGGCGTG GAGACGGCGT TGCCTGATCC GGAGATCTCC
GCAGTGACCG GGACGCCGGT GATTCAGGCG CCGATGATGG GTGGACCGTT CGTCGCCCAA
GTGGGGCAGA TCAATCTCAC CGAAGCCGAG CCACGAGCGA AGGACGAGTC GTGGAACGAG
AAGAAGCCGA AACTGGGACA GAAATCCTGA
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| Protein sequence | MTATIAAAAL KQKFPAVTDR ASADHPAVNV AVTELVAALK TLRDEHGYDV LMDVTAIDWS
ETSSPRFTVV YHVYSTTHHD YVRVAADCAD DVAPVAPSIV SLWPAANWHE RECYDMFGIK
FEGHPDLRRI LMWEGYPGWP LRKEFPLAGV ETALPDPEIS AVTGTPVIQA PMMGGPFVAQ
VGQINLTEAE PRAKDESWNE KKPKLGQKS
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