| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_0483 |
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| Symbol | |
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| ID | 6208773 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 569047 |
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| End bp | 570327 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641690105 |
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| Product | NADH dehydrogenase I, D subunit |
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| Protein accession | YP_001817373 |
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| Protein GI | 182412307 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0649] NADH:ubiquinone oxidoreductase 49 kD subunit 7 |
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| TIGRFAM ID | [TIGR01962] NADH dehydrogenase I, D subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.139003 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCACTG AATTTACCGT TCCCGACAGC GCCGCACGCA TCGCCACCGC CCAGCAGGCC
GGCGGCGGCA CGCCGGTGCG TTCCGGCCCG CCCGACGAGG GCGGCGAGTT CAGCGGCGAC
CGCATGTCGC TGTCGATGGG CCCGTCGCAT CCGTCGACGC ACGGCGTGCT GCGGATCCAG
ATGGAGCTCG AGGGCGAGAT CCTGACGAAG GCGGATCCGA TTATCGGTTA CCTGCATCGT
GGCGACGAGA AGATCGCCGA GAACATGACT TACAACCAGT TCGTGCCGTA CACGGACCGG
TTGGACTACC TCGCGCCGCT GGCCAACAAC ATGGCTTACG TTATCGCCGT CGAGAAGCTC
GCGGGCCTCA CAGTGCCGCC GCGCTGCCAG GCGATCCGCG TGATCACGGC GGAGCTGGCG
CGTATCTCGT CGCACCTGAT GGGCCTCGGC GCATTCGGCC TCGATGTCGG AGCTTGGACC
GTGCTGGTGT TGTCGCTCAA CCAACGCGAG TTTCTCTACA ATCTCTTCGA GGATCTAACG
GGCGCGCGCT TCACGACCAG CTACACGCGC ATCGGTGGCG TCACGCGCGA CGTGCCGCCG
GGCTGGCTGG AGAACGTGGG CACCTTCTGC GACAAGTTCC TGCCGGCGTT GGAAGAGATT
CTCTCGCTGC TCACGCGCAA CAAGATCTTC CTCGATCGCA CCGTCGGCGT CGGCGTGATC
TCGAAGGAGG ACGCGATCGC CTACGGCATC ACCGGCCCGA ACGCGCGCGG CAGCGGCATC
GCGACGGATC TCCGCAAGGA CCGGCCCTAC TCGGGCTACG AGCAGTATGA GTTCGACGTG
CCGGTCGGCA CGAAAGGCGA CTGCTACGAC CGTTATCTGG TCCGCGGCGA GGAGATGCGG
CAGTCGGTGC GGATCATCCG GCAGGTGATC AAGAATTTCC CCGGCGGCGA CTGGTATGCG
ACGGAGGCGA AGAAGGTTTT CCTGCCGCCG AAGGGCAAGG TGCTGAGCTC GATGGAGGAG
CTGATCCAGC AGTTCATGCT GGTCACGGAA GGGCCCCAGA TGCCGGCGGG CGAGGTCTAC
TTCGAAGCGG AGAATCCGAA GGGGATCCTT GGTTTCTACA TCGTCAGCAA AGGTGGTGGC
GTGCCTTACC GCCTGAAAAT CCGCTCGCCC TCGTTCTGCA ACCTGTCGCT GGTCCCGAAG
CTCTGTCAGG GCGTGCTCAT CTCGGACGTG GTCGCGATCC TCGGCTCGCT CGACTTCGTC
ATGGGCGAAT GCGACCGATG A
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| Protein sequence | MATEFTVPDS AARIATAQQA GGGTPVRSGP PDEGGEFSGD RMSLSMGPSH PSTHGVLRIQ
MELEGEILTK ADPIIGYLHR GDEKIAENMT YNQFVPYTDR LDYLAPLANN MAYVIAVEKL
AGLTVPPRCQ AIRVITAELA RISSHLMGLG AFGLDVGAWT VLVLSLNQRE FLYNLFEDLT
GARFTTSYTR IGGVTRDVPP GWLENVGTFC DKFLPALEEI LSLLTRNKIF LDRTVGVGVI
SKEDAIAYGI TGPNARGSGI ATDLRKDRPY SGYEQYEFDV PVGTKGDCYD RYLVRGEEMR
QSVRIIRQVI KNFPGGDWYA TEAKKVFLPP KGKVLSSMEE LIQQFMLVTE GPQMPAGEVY
FEAENPKGIL GFYIVSKGGG VPYRLKIRSP SFCNLSLVPK LCQGVLISDV VAILGSLDFV
MGECDR
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