| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_0475 |
|---|
| Symbol | |
|---|
| ID | 6207878 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | - |
|---|
| Start bp | 560220 |
|---|
| End bp | 562088 |
|---|
| Gene Length | 1869 bp |
|---|
| Protein Length | 622 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641690097 |
|---|
| Product | proton-translocating NADH-quinone oxidoreductase, chain L |
|---|
| Protein accession | YP_001817365 |
|---|
| Protein GI | 182412299 |
|---|
| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit |
|---|
| TIGRFAM ID | [TIGR01974] proton-translocating NADH-quinone oxidoreductase, chain L |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.230809 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCCGA CCCAGCTCGC TTTGCTCGTC CTGCTTCTGC CGCTCGCCTC GGCGGCGGTG
ATCGCGTTGT TCCTCCGTCG GGCCGGTGAG ATCGCGGCCG TGGTTTCTGT GCTCGCGGCC
GCGGGGATCG CCACCGGCGC GTTGATCCTC GCCTTCGGCA ATCACCGTTT CGAAGCGACC
GCCGAGTGGC TGCGGCTGGG CGACTTCTCG TTCCCGCTTG GGTTCAAGTT CGATGATCTC
GCCGCGCTGA TGCTCTTCGT CGTCGGCGTC GTGGGTTTCT TCATCCACGT CTTTTCGTTC
GGTTACATGC GCGAGGACAC CGCCAAGGCG CGCTACTTCG GCGGACTCTC GATCTTCATG
TTCTCGATGA TCGGCATCAC CGTCGCCGAC AATCTGTTCA TGATGTTCGT TTTTTGGGAG
CTGGTCGGCT TCAGCTCCTG GCTGCTGATC GGCCACTGGC ACGAGCGTCC GTCCGCCAGC
GCCGCCGCCA AAAAAGCTTT CATCGTCAAT CGCGTGGGCG ACTTTGGTTT CCTGCTCGGT
ATCGCGATGT GTTACTGGGT TCACGGCACG GTGACTCTCA GCGAACTCGA CGGCGTGCAG
CCGGTCGGCG CGCTGCTGCC GCTGCTGCTG TTCTGCGGCG CCGTCGGCAA GTCCGCGCAG
ATGCCACTGC AGGTCTGGCT GCCCGACGCG ATGGAGGGCC CGACGCCGGT CTCCGCCTTG
ATCCACGCGG CCACGATGGT CGCCGCCGGC ATCTACATGC TGTGCCGGAT CAACGTGCTG
ATGGTGCCCG AGGCGCTCAC CGTGATCATG TGGGTCGGCA CCGCCACTGC GCTCTACGCC
GCGCTCTGCG CCATCGTGCA GAGCGACATC AAAAAGGTCC TCGCTTACTC CACGCTCTCC
CAACTCGGCT ACATGGTGGC GGCGTTCGGA CTCGGTTCGC TCGCGGAGCG ACACGAGATG
GGCGGCGCCG TGCACGAGAT CGTGATCGCC GCCGGCGTGG GCGCGGCGAT GTTCCACCTC
GTCACGCACG CCTTTTTCAA GGCACTGCTC TTCCTCGGCT CTGGCTCGGT CATCCACGGC
TGTCACCACG AACAGGACAT TTTCAAGATG GGCGGACTGG TGAAGCGGAT GCCGGTCACG
TTCGCCACCT TCACGATCGG CGTGCTCGCG ATCATTGGCA TGCCGGGACT CGCCGGCTTT
TTCTCGAAGG ACGCGATCCT GCTCCTCGCG TACCAAAAGA ATGCCGCCGT CTTCGTGGTG
CTCGCATTCA CCGCGATCCT CACCGCGTGC TATATGGTGC GCGTGTGGAA GATCACCTTC
TTCGGCGCGC CACGCAGCGA ACACGCGGAG CATGCACACG AAAGCGGCAG CGTGTTGACG
ATGCCGCTGA TCGTTCTCGC CGCGCTCGCG ATCCTGGGCG GCTACATCGG CCTCTATCCC
GACGTGTTCA CCGGCGTGCT CGATCTTGTG CCCGAGGCGC ACGGCAGCAC GCATACCACG
ATCCTGCTGA CGAGCCTGGC GGTGATGGTG ATCGGCGCGG GAGCCGGCTA CGCCTTCTAT
CGGCCGGGGG CCGAGGACGC CCTCGCGGTG AAGTCGCCCG GTGCGTTCAC CTCGCTGGTT
GGACTGCGCA ATTCGTTCGA CGCCGCCTAC GATTACTACG TGGCGAAAGT GCAGCAGCGG
TTCGCGATGC TGCTGAACTT CCTCGAGCAG ATCTTCCTCG CCGGCCTGAT CATCCGCGGA
CTCGCCGGCG TGGTCGGACT TTTCGGGCTC GGCGCGCGCG CCGTGCACGT CGGCAAGCTG
AACGCTTACG TGTATTGGTT CCTCGGCGGC GTCGCCGTCC TCTGGCTGTT CGCGAAGGGA
GTGCTGTGA
|
|---|
| Protein sequence | MTPTQLALLV LLLPLASAAV IALFLRRAGE IAAVVSVLAA AGIATGALIL AFGNHRFEAT
AEWLRLGDFS FPLGFKFDDL AALMLFVVGV VGFFIHVFSF GYMREDTAKA RYFGGLSIFM
FSMIGITVAD NLFMMFVFWE LVGFSSWLLI GHWHERPSAS AAAKKAFIVN RVGDFGFLLG
IAMCYWVHGT VTLSELDGVQ PVGALLPLLL FCGAVGKSAQ MPLQVWLPDA MEGPTPVSAL
IHAATMVAAG IYMLCRINVL MVPEALTVIM WVGTATALYA ALCAIVQSDI KKVLAYSTLS
QLGYMVAAFG LGSLAERHEM GGAVHEIVIA AGVGAAMFHL VTHAFFKALL FLGSGSVIHG
CHHEQDIFKM GGLVKRMPVT FATFTIGVLA IIGMPGLAGF FSKDAILLLA YQKNAAVFVV
LAFTAILTAC YMVRVWKITF FGAPRSEHAE HAHESGSVLT MPLIVLAALA ILGGYIGLYP
DVFTGVLDLV PEAHGSTHTT ILLTSLAVMV IGAGAGYAFY RPGAEDALAV KSPGAFTSLV
GLRNSFDAAY DYYVAKVQQR FAMLLNFLEQ IFLAGLIIRG LAGVVGLFGL GARAVHVGKL
NAYVYWFLGG VAVLWLFAKG VL
|
|---|
| |