Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_0461 |
Symbol | |
ID | 6205532 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | - |
Start bp | 543555 |
End bp | 545438 |
Gene Length | 1884 bp |
Protein Length | 627 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641690083 |
Product | TPR repeat-containing protein |
Protein accession | YP_001817351 |
Protein GI | 182412285 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG3914] Predicted O-linked N-acetylglucosamine transferase, SPINDLY family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.999909 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.380381 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCTCCG CCAAACTCAT TTCCCTGCTG CAAGCCGGCG CGGCGCACCA TCGCGCCGGA CGGCTGGTTC AGGCGGAGGC ACAATACCGG CAGGCGGTGC TGGGCGCGCC CAAAAGCTTC GAAGCGCTGC ACCTGCTCGG CCTGGTGAAC TTCCAGTTGG GCCGAATGGC CGAGGCCGCG GATCTGCTGC AACGGGCGTT GCGCGTGAAC CCCCAGTCGG CGCCCTGTGC GATGCAGTTG GGCATGGTGC TCGTGGCGCT GGGACGACAC AAGGAAGCGG AGGCGCATCT GCGTGGCGTG GTGACACGCC AGCCGCAGCT GCACGAAGCC TGGACGCACC TGGCCCACTG CCTGAAGACC CAAAACCGGC TGCGCGAGGC GATCGACTGC TATCAGAAAG CCATCGAGTT GGAGCCGAAG GACGCGCTGG CGTGGTATAA CTACGGCCTC ACGTTGAGTC TCGCGGCGCG ACCCCTGGAA GCTCTTGCCT GTCACGAACG CGCGCTCGCG ATCGACCCGC ATCACGCCGA GGCGCGGTTT GGTCGCGCGC AAGCATTGCA GCAAACGAAC CGGATTCCCG AAGCGGTGGA AGACTATGGC CGCGTGCTCG CCCGGCAGCC GGGAAATCTC GAGGCGCGGA GCTACCGGTT GTTCGCGCTG CACTACCTCG AAGGGGTTTC GCGCGACCAA CTGTTCGCGG AGCATGTGGA GTACGGACGA ATCGCCGGCG GGCCCACGGT TCAGGCGTTC AAGAACGTGC CAGACCCGAA CCGGCGGCTG CGGGTGGGCG TGCTGTCGCC TGATTTTCGG CTTCACGCCT GCGCCTACTT TATCGAGCCG CTCTTGCAGC ACCTGAATCC GCGGGAGTTT GAGCTGTGTC TCTACCACAA TCACCCGCGC GAAGACGAGG TGACCGCGCG TTTTCGGACG CGCGCCGCGG TGTGGCGAAA TTTCGTGGGA CGTTCGCATT CCTTCGTGGA GGCCACGATC CGCGAAGACG CGCCGGACGT CCTGATCGAT CTGGCCGGCC ACACGGGATT CAATCGGCTG CCGATCTTCG CCCATCGGCT GGCACCAGTG CAGATCACCT ATCTCGGCTA TCCCGATACG ACCGGTGTCG CGGCGATGGA TTATCGTTTC ACCGACGCGC TCGCTGACCC GCCGGGTGAG GCGGACGCGT TGGCGACGGA GAAACTGGTG CGGTTTGCGC CGACGGCATG GGCCTATCTT GCGCCGCCCG ACTCACTCGC ACCCAACACG CGTGAACCGG CAGCGGATGG ATCGGTGGTG TTCGGCAGCT TCAATAATCT CTCGAAGATC ACCGATTCGA TGCTGGCCGT GTGGGGCCGG CTGTTGAAGC AGGTGCCGAA CGGCCGGCTG CTCCTGAAAG GGGTAGGCCT GTCGGAGCCT GAATCGCGCG GGCGCTACGT CGCCCGCATG GAGACGGCCG GGTTGCCCGT GGACCGCGTT GAACTGCTTG AACGCACTCC CGACACCGCA GCGCACCTGG CGCTGTACCA TCGCGTCGAC GTGGCGCTGG ACACCTTCCC CTATCATGGC ACGACCACGA CCTGCGAGGC CTTGTGGATG GGTGTGCCGG TGGTGACGCT GGCGGGAGAC CGGCATTCGT CGCGCGTAGG CGTGAGCCTG CTGAGCGCGG TCGGTCATTC GGAATGGATC GCGCACTCTG CGGATGACTA CGTGGCCATC GCGCTGGCGC TCGCCGCGGA TCCGGCGAGA CGCGCCCAAC TGCGCCGGGA TTTGCGCGAG GGCCTGAAGC GCAGTCCGCT GCTTGATCAT CCGGCGCAGG CGGCCCGATT CGCGGCGGGA TTGCGGCAGT GTTGGGGCGA GTGGTGCTTG CGTCACGGAG CCCTCGGAAC GTGA
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Protein sequence | MTSAKLISLL QAGAAHHRAG RLVQAEAQYR QAVLGAPKSF EALHLLGLVN FQLGRMAEAA DLLQRALRVN PQSAPCAMQL GMVLVALGRH KEAEAHLRGV VTRQPQLHEA WTHLAHCLKT QNRLREAIDC YQKAIELEPK DALAWYNYGL TLSLAARPLE ALACHERALA IDPHHAEARF GRAQALQQTN RIPEAVEDYG RVLARQPGNL EARSYRLFAL HYLEGVSRDQ LFAEHVEYGR IAGGPTVQAF KNVPDPNRRL RVGVLSPDFR LHACAYFIEP LLQHLNPREF ELCLYHNHPR EDEVTARFRT RAAVWRNFVG RSHSFVEATI REDAPDVLID LAGHTGFNRL PIFAHRLAPV QITYLGYPDT TGVAAMDYRF TDALADPPGE ADALATEKLV RFAPTAWAYL APPDSLAPNT REPAADGSVV FGSFNNLSKI TDSMLAVWGR LLKQVPNGRL LLKGVGLSEP ESRGRYVARM ETAGLPVDRV ELLERTPDTA AHLALYHRVD VALDTFPYHG TTTTCEALWM GVPVVTLAGD RHSSRVGVSL LSAVGHSEWI AHSADDYVAI ALALAADPAR RAQLRRDLRE GLKRSPLLDH PAQAARFAAG LRQCWGEWCL RHGALGT
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