| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_0461 |
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| Symbol | |
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| ID | 6205532 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 543555 |
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| End bp | 545438 |
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| Gene Length | 1884 bp |
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| Protein Length | 627 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641690083 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001817351 |
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| Protein GI | 182412285 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3914] Predicted O-linked N-acetylglucosamine transferase, SPINDLY family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.999909 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.380381 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCTCCG CCAAACTCAT TTCCCTGCTG CAAGCCGGCG CGGCGCACCA TCGCGCCGGA
CGGCTGGTTC AGGCGGAGGC ACAATACCGG CAGGCGGTGC TGGGCGCGCC CAAAAGCTTC
GAAGCGCTGC ACCTGCTCGG CCTGGTGAAC TTCCAGTTGG GCCGAATGGC CGAGGCCGCG
GATCTGCTGC AACGGGCGTT GCGCGTGAAC CCCCAGTCGG CGCCCTGTGC GATGCAGTTG
GGCATGGTGC TCGTGGCGCT GGGACGACAC AAGGAAGCGG AGGCGCATCT GCGTGGCGTG
GTGACACGCC AGCCGCAGCT GCACGAAGCC TGGACGCACC TGGCCCACTG CCTGAAGACC
CAAAACCGGC TGCGCGAGGC GATCGACTGC TATCAGAAAG CCATCGAGTT GGAGCCGAAG
GACGCGCTGG CGTGGTATAA CTACGGCCTC ACGTTGAGTC TCGCGGCGCG ACCCCTGGAA
GCTCTTGCCT GTCACGAACG CGCGCTCGCG ATCGACCCGC ATCACGCCGA GGCGCGGTTT
GGTCGCGCGC AAGCATTGCA GCAAACGAAC CGGATTCCCG AAGCGGTGGA AGACTATGGC
CGCGTGCTCG CCCGGCAGCC GGGAAATCTC GAGGCGCGGA GCTACCGGTT GTTCGCGCTG
CACTACCTCG AAGGGGTTTC GCGCGACCAA CTGTTCGCGG AGCATGTGGA GTACGGACGA
ATCGCCGGCG GGCCCACGGT TCAGGCGTTC AAGAACGTGC CAGACCCGAA CCGGCGGCTG
CGGGTGGGCG TGCTGTCGCC TGATTTTCGG CTTCACGCCT GCGCCTACTT TATCGAGCCG
CTCTTGCAGC ACCTGAATCC GCGGGAGTTT GAGCTGTGTC TCTACCACAA TCACCCGCGC
GAAGACGAGG TGACCGCGCG TTTTCGGACG CGCGCCGCGG TGTGGCGAAA TTTCGTGGGA
CGTTCGCATT CCTTCGTGGA GGCCACGATC CGCGAAGACG CGCCGGACGT CCTGATCGAT
CTGGCCGGCC ACACGGGATT CAATCGGCTG CCGATCTTCG CCCATCGGCT GGCACCAGTG
CAGATCACCT ATCTCGGCTA TCCCGATACG ACCGGTGTCG CGGCGATGGA TTATCGTTTC
ACCGACGCGC TCGCTGACCC GCCGGGTGAG GCGGACGCGT TGGCGACGGA GAAACTGGTG
CGGTTTGCGC CGACGGCATG GGCCTATCTT GCGCCGCCCG ACTCACTCGC ACCCAACACG
CGTGAACCGG CAGCGGATGG ATCGGTGGTG TTCGGCAGCT TCAATAATCT CTCGAAGATC
ACCGATTCGA TGCTGGCCGT GTGGGGCCGG CTGTTGAAGC AGGTGCCGAA CGGCCGGCTG
CTCCTGAAAG GGGTAGGCCT GTCGGAGCCT GAATCGCGCG GGCGCTACGT CGCCCGCATG
GAGACGGCCG GGTTGCCCGT GGACCGCGTT GAACTGCTTG AACGCACTCC CGACACCGCA
GCGCACCTGG CGCTGTACCA TCGCGTCGAC GTGGCGCTGG ACACCTTCCC CTATCATGGC
ACGACCACGA CCTGCGAGGC CTTGTGGATG GGTGTGCCGG TGGTGACGCT GGCGGGAGAC
CGGCATTCGT CGCGCGTAGG CGTGAGCCTG CTGAGCGCGG TCGGTCATTC GGAATGGATC
GCGCACTCTG CGGATGACTA CGTGGCCATC GCGCTGGCGC TCGCCGCGGA TCCGGCGAGA
CGCGCCCAAC TGCGCCGGGA TTTGCGCGAG GGCCTGAAGC GCAGTCCGCT GCTTGATCAT
CCGGCGCAGG CGGCCCGATT CGCGGCGGGA TTGCGGCAGT GTTGGGGCGA GTGGTGCTTG
CGTCACGGAG CCCTCGGAAC GTGA
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| Protein sequence | MTSAKLISLL QAGAAHHRAG RLVQAEAQYR QAVLGAPKSF EALHLLGLVN FQLGRMAEAA
DLLQRALRVN PQSAPCAMQL GMVLVALGRH KEAEAHLRGV VTRQPQLHEA WTHLAHCLKT
QNRLREAIDC YQKAIELEPK DALAWYNYGL TLSLAARPLE ALACHERALA IDPHHAEARF
GRAQALQQTN RIPEAVEDYG RVLARQPGNL EARSYRLFAL HYLEGVSRDQ LFAEHVEYGR
IAGGPTVQAF KNVPDPNRRL RVGVLSPDFR LHACAYFIEP LLQHLNPREF ELCLYHNHPR
EDEVTARFRT RAAVWRNFVG RSHSFVEATI REDAPDVLID LAGHTGFNRL PIFAHRLAPV
QITYLGYPDT TGVAAMDYRF TDALADPPGE ADALATEKLV RFAPTAWAYL APPDSLAPNT
REPAADGSVV FGSFNNLSKI TDSMLAVWGR LLKQVPNGRL LLKGVGLSEP ESRGRYVARM
ETAGLPVDRV ELLERTPDTA AHLALYHRVD VALDTFPYHG TTTTCEALWM GVPVVTLAGD
RHSSRVGVSL LSAVGHSEWI AHSADDYVAI ALALAADPAR RAQLRRDLRE GLKRSPLLDH
PAQAARFAAG LRQCWGEWCL RHGALGT
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