| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_0459 |
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| Symbol | |
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| ID | 6208320 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 539948 |
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| End bp | 542314 |
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| Gene Length | 2367 bp |
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| Protein Length | 788 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641690081 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001817349 |
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| Protein GI | 182412283 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3914] Predicted O-linked N-acetylglucosamine transferase, SPINDLY family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.202007 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.25105 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTCTGG ACGCGCTTTT GCCTCAACCC TTCGTCACGC CACAAACCCC TCAAGCGACC
CCGGACGGCA AGCCGTCTGC TGCGCAGCCA TGCGCGGCCG CGGTTGCAGC AGCCCGGAGT
TGTCTCGCGA CCTACCTGGC GGCACCGGCG TCGGCCGAAG CTTGGACCAA TTTCAGCAAC
GCCGTGCAGG CTGCGGCGAA CGCGGCGGCG GCGCTGCCGC ACAGCGCGAC CGATGCCATC
CTGCGTGCGG ATCTCGGCGA ATTGATCCGC AAGGTTGTGG CCGCGGGAGT GCAGGAGCGA
CTGGCCGTGA GCGATGCCGC GGTTCCGGTC GCGAAAGGCT GGCCAGGGCT GGTTGCGCAG
ATGCTGCTGC GGCCGGCGTG GGCGATCGCC GTTTTACCGG AGCTGGAGCG TGTGCCGGAG
TGGTTGATGC TTACCTGTGC GGAGTGGCTG TTCGCCGTGC CGGAGAGTTT CGCGGCACCG
GGGCAGGCAG ACGCCTACGC GGCGCACTGC GAGCGACAGC TCACCAAGCT GGTCGAAGGT
GTGGAGCGGA ATCCTGGGGC GCTTGCCGTC CGTACGGCGC TGGACCATTA CCAGACTCGT
TCGAACCAGG CGCTGCTGCG GTTGAGTTCG CAGAGCCTCC GTCGGCACGC CGAGCTGCAC
GCGCGGCTGA TCGCGCGGCT CGAACGGAAA AAAATCAGCG TCGAACCGCC GGTGGCGATC
GGTCGCGAGG GGCGGCTGCT GCGGTTGGGA TTTGTGGTGC CGGAATTCGA TGGCAGCGCG
GCGATGCACG CTACGATGCC GCTGCTCGGT CATCTGGATC CGGATCGGTT CGAGACACAG
GTTTTTATCC TGCGACCGAC TGAGAACCGT TGGGAAAGCG CGGTCCGGCA AAGCGCCGCG
CAGGTGCAGA CCCTGCCGGC AGACGTGGCG GAGCAGGCGG CCCTGATCGC TGGATCGATG
CTCGACGTGC TGGTTTTCTG TGGCGAACTG ACAGGCAGTT TTGGCGACCT CGCGAAACTG
GCGACGGCGC GGCTGGCGCC GCTGCAGGTT GCGACGTCGG CCCACCATGG GGGCACGACC
GGCTTCGTGA ACATCGATGT GTTCGTGGCG GGGGCGTTCA CCGAGGTGGA CAAGGATCCG
GCGCAGTTCA GCGAGCGGCT GGCCGTGATG GCGGGGCCTG CGCGAACGTT CGATTTTGTG
ACGGGCACCG GAGCGGTCGA GACGCAGATC ACGCGTGCCG ACGTTGGACT GCCGGCGGAT
GCGGTGGTGT TCGCTGCCGC GGCGGACTGG ACCCAGATCA CACCGGAGGT TCTGGCTTCG
TGGAGCCGGC TGCTGTCGGC GGTGCCGAAC AGCCGGTTGT TGTTCCAGCG GACGGGCGCC
GATGCTGTTG ACGCGGACAT CGCAGCACGC GCCTGCGCGG CGATCGATCG CGCGCTGGCC
GGGGCTGGAA TTGCTGATGA CCGCAGCGTA CTACTTACCG CGGTGCCGGC TTCGCAACAC
GAGCTGGAGG CGGTGCTTTC ATTGGGGGAC GTTTATCTCG ACGTCAGCGG CGAGGATGCG
GCGGCGGTAG CGGCGCTGAG CCGTGGCGTG CCAGTGGTGA CGCACGCGGG CGCGCATCTG
CGCGGTCAAC GCGTGGCAGC GCTGCTACGC TCGATTGGCT GCAGCGAACT GATCGCGCCA
CGCGCTGAAG AGATGAACGG GCTGGTGGTA GGACTCGCGC GCAACGCCGA GCAGCGCGCC
GGGCTGGCGG AACGGATTCG CAGCACGATG GCGTGCGTGG CCTGGCCATT CGACGCGCTC
GCGACCGGCG ACGCGTTCGG CGATGTGCTG GAGTCCGCGT TCGACGAAAT GCTTTCCGTG
GGCGAGCGAA AGCTCCACGG CAACGACGGG CCGATCCAAA TCAACGGCGA CGCGATCGCG
CTGCCGGAGC ATCTGCGGGC GGCCGAGCAG GCGTTGAGTG ACGCTGACTA TTTCAATGCA
GCCGCCGAAG CGCGGCAGAT GCTGCGGGCG CAGCCGGCAA ACGCCGTGGC CCGTGCACTC
CTCGGCCGAG CCCTGTTGGG CCTCGGTCAG GTCGCGCGTG CCGTGGACTA CCTGTTGCCC
GCGGTGGAAG CCGCCGACGC GAACGCGGCG CGCTGGCTCT ATCTCGCGCA GGCGATGCAT
GGAAACGGCC AGAGCAGTGA GGCGATTCAG GCCTTGCAGA CGAGTCTGCA GCTCGACGTC
ACGAACGGGG AGGCGTGGCT GATGTTGATC GACCTGGCGG AAGCCGTCGG CGCGACTGAC
CTCGCGCGCG ATGCGTTCAC CGAGCTGAAG CGCCACGCGC CGAATCACCC GCAGATCGCA
GCGCTTTCCG CCCGCCTCGG CTGCTGA
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| Protein sequence | MPLDALLPQP FVTPQTPQAT PDGKPSAAQP CAAAVAAARS CLATYLAAPA SAEAWTNFSN
AVQAAANAAA ALPHSATDAI LRADLGELIR KVVAAGVQER LAVSDAAVPV AKGWPGLVAQ
MLLRPAWAIA VLPELERVPE WLMLTCAEWL FAVPESFAAP GQADAYAAHC ERQLTKLVEG
VERNPGALAV RTALDHYQTR SNQALLRLSS QSLRRHAELH ARLIARLERK KISVEPPVAI
GREGRLLRLG FVVPEFDGSA AMHATMPLLG HLDPDRFETQ VFILRPTENR WESAVRQSAA
QVQTLPADVA EQAALIAGSM LDVLVFCGEL TGSFGDLAKL ATARLAPLQV ATSAHHGGTT
GFVNIDVFVA GAFTEVDKDP AQFSERLAVM AGPARTFDFV TGTGAVETQI TRADVGLPAD
AVVFAAAADW TQITPEVLAS WSRLLSAVPN SRLLFQRTGA DAVDADIAAR ACAAIDRALA
GAGIADDRSV LLTAVPASQH ELEAVLSLGD VYLDVSGEDA AAVAALSRGV PVVTHAGAHL
RGQRVAALLR SIGCSELIAP RAEEMNGLVV GLARNAEQRA GLAERIRSTM ACVAWPFDAL
ATGDAFGDVL ESAFDEMLSV GERKLHGNDG PIQINGDAIA LPEHLRAAEQ ALSDADYFNA
AAEARQMLRA QPANAVARAL LGRALLGLGQ VARAVDYLLP AVEAADANAA RWLYLAQAMH
GNGQSSEAIQ ALQTSLQLDV TNGEAWLMLI DLAEAVGATD LARDAFTELK RHAPNHPQIA
ALSARLGC
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