| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_0456 |
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| Symbol | |
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| ID | 6208411 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 532656 |
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| End bp | 535967 |
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| Gene Length | 3312 bp |
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| Protein Length | 1103 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641690078 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001817346 |
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| Protein GI | 182412280 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1887] Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.713819 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.332791 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTGTCC TCTTTTTTAC CGGAAGCCCA GCCAGCTACA TGGCGCCCCC ACTGCTGGGA
GTGTCACAGG TTAACTGTGG CCCGGACTGG CCGGATCGAG TGGTCGATGG GAAGGTGGTC
TCGCTGAAAT CTCCGGTCGG GGCGTACGAC GTGGAGCCGT TCGTGAAGCG ATTGCCGGCG
ACGCAGAGGC CGGACGTGGT GGTGTGCCTA GTCGATGCGG CTCGGCGGAA TCTGCCCGCT
AACCTGCGCG CTTTTCGAGG TCCCAAAGTG CTGTTGGTGG CGGACACCCA TCACCTCCGA
GCACCGATTT CTGGAATGCT GCAGTATGCC ACCTCGGAGC CCTACGATCG GATCATAGTC
TTGTATGATC GGCATCATCT GGAGTTTTTC CGGTCTGCGG GATTGAAAAA TCTGTTCTGG
TTCCCGGGCC TCACTTTTCC GCACAGCGAC GACCAGGTGG CGCGGGCCAG AAAGAGCTGG
GAGCTGCGCA GCCGACAGAT CGCATTTGTT GGCCAGACCG GCGGCCTACA TCCGCGACGC
GCCCGGCTGG TCGGGGCCCT TGCGCAAGCC GGTTTACCCG TGGGCGCCAA ACAGATTCCG
CAGCGGGAGG GGCTGGAGTT CTATGGCTCC TCGGCGATCG GACTGAATGT CAGCCTGAAT
GGCGATTTGA ATCTCCGGGT TTTTGAGATC CTCGCGTCAG GGGCGATGCT GCTGACCGAT
CAACTCGCTC CGAGTTCAGG GATGGATCAG CTATGGAGCG GAAACCAGCT AGCGAGCTAT
CGTAGCGAAC CTGAACTGCT GGAGGCTGCG GCCCATTATC TGAAGCATCC GACCGAAGCT
GCTGCGATTG CGAAACGGGG TGTGACTTGG TTAGACCAAC TTTTCGGCGA AGAGAAACGC
CGGCTGGCTT TCGAACACAT CGTCTTCGAC GGCGTACCCG TGCCGGAGTT TGTCCTGCCG
CCGACGAAGG TGAAAGCATG GTTCGCCGAT GCTCCGCGGC AGCGCGACAG CGCCATCAAA
GTCTACGAAC GGGTGCAGGA ACTTCATCGG CAGCAGGAGA CCGTTGCCAT CGCAATCGAT
GCAGCAGTAT CAAAGGATGC CGCCGAGATG CTTGCCACGC TGCCCCGAGT GTCGGCCGCC
TCGTGTTTTA GTAGCGCGAA TGATCTCGCG GTGGTCAGTG GCTGCACGCT CGATCAGGTG
AGCCTGAGCC AGGCCGCCCG CGTGTGGGTT GTTGATGCGG CGCAGTCCAG CGTCGCAGCG
GCGTTATCTG CTGCGGGACT TCAGCCGATC GATCGTGAGA TCGGCTTATT CGCGCGAGAT
CCACAGGAGA TCGAGGAAGC CAGACTCCTT CACTCTGCGT GCTGGCGGCA TCTCCACGCG
GGCGACTACG CGCGCGCGCT GGAGTTGGCC CGAGCGACGC TCGCGAAAGA CCCCAAGGAT
GTGGATGCGC TGGTGACCAT GGCGGATCTG GCCCTGGAGG CGTGCAATCG ACCATTGGCG
ACCAAGCTTC TTCAAACGCT TCGAGGAATT GCGCCTTTGG ATCCACGGCT GCAATCGTTG
ACGGCAGATC TGACGCGCGG CTCGTACACC CCCAAGTTAC CTCAGCGACT GTTGAACACG
GCCCGAGACC TCGCGACCAA ACGCGACTGG AAGCGCGCCG GAGTCTTCGT CGCCAAGGCG
CTTGAGCTTG AACCAGGACT GCGCGGAGCG TACGCCTTGT TCGGCAGAAT CCACAGCGAG
CTCGGGAACT ATCAAGAGGC GGCCGACACA CTGCTCCAAG CACTGAAACA GGAGGACACG
GCCGATGCGT GGATGGGACT TGGCCATATC CTGTCAAAGG GGAGACAGAA TAGGGAAGCC
GCTGACGCCT TCCGGAAGGC GCTCGTTCTG GCACCGGTCG CAATCGCAAC GATCCATGCG
GTTGCTGATG CTGCGATCAC GATCGGAGAC TGGAAGCTGC ACTCGGACGC TGTCGGCATG
CTCCGTGAGC GCGATCCTTT AGCTCCACAT TCACACTTTC ATTTCGGCCA TCAGCTGAAG
CACCAACGCC GGATTCACGA TGCGCTCCGT CATCATTGCC GCTGGTGCAA TGCCCCTGAG
CCGCGTCCGG TCTCCACCAG CAGCTATCGA GTCCTGTTCG TGCTGCAGCA TCCGCCTTTC
TGGCCCAGCC TGGCTTCGGT CTACGCTGCC TTCGCGGCAG ATCCTGCCTG TGAGGTGACC
GTGGTGGCCT TGCCGTACGA ACACCCTTAC TACGCAAAGC CGGAGGAGCG CGACGCGATC
TACGGGTTCC TCGACAAGTT GGAAATACTG TATGTGCGAG CGGATCAGTT TCGGCGTGCT
GCGGGTTGTG CCGACATCGC ATTCGTGCAG TCGCCGTATG AGGTCACGCG GCCCTCTGGC
TGGAAAATCT CCGATCTGTT GCGGTTCGCG CCCCGTCTGG TTTACGTCCC CTATGCCTTG
GAGATTGGAG GGGGGGAGGA GAATCTCTCG CTGCTTTTTA ACCAACCGCT CCATCAGCTT
GCCTGGATGA TCTGCGCGCG CTCACCGCGG CACAAAACCC TTTTTGCACA GCGGTGCGAT
GTGGGCGACG CACACGTCGA GGTCACAGGC CATCCGAAAA TGGACGCGTT GCGAAACCTC
GAGACGGCAC GTGACGCGGA ACTCGACGCA TTCATTGGCA GCCGGAAGGC GGTGTTGTGG
AATCCACAAT TTGACGTGCG GCCTGGCCTT TCAGAGTTCG GGACCGGTTT TTCGACCTTC
CTGCGTTGGC GTAGCTACCT CCCGGAGGCC TTTGCCCGCC GGTCGGAGAT GGCCTTCATT
CTTCGCCCGC ATCCGCTGTT CTTCGCATCG CTCGAAAAGC GTGGCGTGGC GAGTGCAGCG
GAGATCGCCG ATTTCCTCCG CCGGTGCGAG GCCGCAGGGA ACATCCATTT GGATCGACGG
CCATCTTATC TACCAGCATT TGCAGCCTCC ACGGCGTTGA TGTCCGACGC ATCGTCGTTC
TTGCTCGAGT ATGGTGCCAC GGGGCGGCCC ATCCTTTACC TTCATAATCC GGATGGCCCA
GGGCTAAACC ACGACGGCGA CTTCGTGCGC GACTACTGCG CGACGGCAAC AACCGAGAGC
GAGATCGAGG CCTTTCTCGA TGACGTTGCG GCCGCCCGCG ACGCGCGCGG TGCGGAACGA
CGGGCGGCTT ACCACGAATT CATGCATGTG CCGGCCGAGG GGGTCGGCCA ACTGATCAAG
GAAACCGTCG AGGAGCGGCT CGCAGCGGAG CACGCCGAAC GGACGTCCGA GGCGGTCACA
GTCCTCGCCT GA
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| Protein sequence | MRVLFFTGSP ASYMAPPLLG VSQVNCGPDW PDRVVDGKVV SLKSPVGAYD VEPFVKRLPA
TQRPDVVVCL VDAARRNLPA NLRAFRGPKV LLVADTHHLR APISGMLQYA TSEPYDRIIV
LYDRHHLEFF RSAGLKNLFW FPGLTFPHSD DQVARARKSW ELRSRQIAFV GQTGGLHPRR
ARLVGALAQA GLPVGAKQIP QREGLEFYGS SAIGLNVSLN GDLNLRVFEI LASGAMLLTD
QLAPSSGMDQ LWSGNQLASY RSEPELLEAA AHYLKHPTEA AAIAKRGVTW LDQLFGEEKR
RLAFEHIVFD GVPVPEFVLP PTKVKAWFAD APRQRDSAIK VYERVQELHR QQETVAIAID
AAVSKDAAEM LATLPRVSAA SCFSSANDLA VVSGCTLDQV SLSQAARVWV VDAAQSSVAA
ALSAAGLQPI DREIGLFARD PQEIEEARLL HSACWRHLHA GDYARALELA RATLAKDPKD
VDALVTMADL ALEACNRPLA TKLLQTLRGI APLDPRLQSL TADLTRGSYT PKLPQRLLNT
ARDLATKRDW KRAGVFVAKA LELEPGLRGA YALFGRIHSE LGNYQEAADT LLQALKQEDT
ADAWMGLGHI LSKGRQNREA ADAFRKALVL APVAIATIHA VADAAITIGD WKLHSDAVGM
LRERDPLAPH SHFHFGHQLK HQRRIHDALR HHCRWCNAPE PRPVSTSSYR VLFVLQHPPF
WPSLASVYAA FAADPACEVT VVALPYEHPY YAKPEERDAI YGFLDKLEIL YVRADQFRRA
AGCADIAFVQ SPYEVTRPSG WKISDLLRFA PRLVYVPYAL EIGGGEENLS LLFNQPLHQL
AWMICARSPR HKTLFAQRCD VGDAHVEVTG HPKMDALRNL ETARDAELDA FIGSRKAVLW
NPQFDVRPGL SEFGTGFSTF LRWRSYLPEA FARRSEMAFI LRPHPLFFAS LEKRGVASAA
EIADFLRRCE AAGNIHLDRR PSYLPAFAAS TALMSDASSF LLEYGATGRP ILYLHNPDGP
GLNHDGDFVR DYCATATTES EIEAFLDDVA AARDARGAER RAAYHEFMHV PAEGVGQLIK
ETVEERLAAE HAERTSEAVT VLA
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