Gene Oter_0438 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_0438 
Symbol 
ID6207580 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp513942 
End bp514382 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content66% 
IMG OID641690060 
Productresponse regulator receiver protein 
Protein accessionYP_001817328 
Protein GI182412262 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTTCGC GGGGCGCTTC AACTTCCAAC CCTGGGCCCA ACGTGCAATC ATCTTCAACC 
AAACCGAGCG ACGGGCTGGT CCTGCTGGTG GAGGACGAGG AGTCCTTAGG CGACCTGCTG
GTGCACCTGC TCGGCCGGGC CAAGATTCGG GCCTTGCGCG CCGGTGACGG CAACCAGGCC
CTGCAGATTT TCTCCGACCA TCAGCGGGAG ATCGTCATGG CCTTCGTCGA TTGCCGGCTG
CCGGACATCG ACGGCGGCGA CCTCTGCCGT GAACTGCGGC GGCTCAGCCC GGGCCTGCCG
CTGCTGCTGA CGAGCGGACG CGATCAACGC GCGCTCGTGA CGAGCCTCGC AGGCGGCGGT
CGCACCGGCT TCCTGCAGAA GCCCTATATG CCGGCGGACG TCGTGCGTCA CGTAAACGCG
CTGTTAAGCC AGCCTGCCTG A
 
Protein sequence
MISRGASTSN PGPNVQSSST KPSDGLVLLV EDEESLGDLL VHLLGRAKIR ALRAGDGNQA 
LQIFSDHQRE IVMAFVDCRL PDIDGGDLCR ELRRLSPGLP LLLTSGRDQR ALVTSLAGGG
RTGFLQKPYM PADVVRHVNA LLSQPA