Gene Oter_0423 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_0423 
Symbol 
ID6208284 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp498180 
End bp499199 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content63% 
IMG OID641690045 
Productflagellar motor switch protein FliG 
Protein accessionYP_001817313 
Protein GI182412247 
COG category[N] Cell motility 
COG ID[COG1536] Flagellar motor switch protein 
TIGRFAM ID[TIGR00207] flagellar motor switch protein FliG 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.442925 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGACC TCGATTTCGT CAAAGCCAAC CGCCAGCAGA AGCTCGCGAT TTTCCTCGTG 
GTCATCGGCC CCGAGGCGGC GGCGAACATT CTCAAGCATT TTGAAGAGCC CGAGATTGAG
CTGCTCTGCC GCGAGATGTC GCAGCTCACG ATGATCCCCG AGGCCATGCA GAAGCAGGCG
CTCGAGGAGT TCGCGGGACT GATCGCCGCC AGTCACAGCT CCGCATTGGG CGGTCTGGAT
TACGCGCAGC GCACGCTCGA AATCGCGAAA GGCGACTACA AGGCTTCCGC CATCATCTCC
CGCGTCGGAC CGGTGGGCAC GTCGGTCGAC GTGATCCGCG AGATCAGCGA TATGGAGGGC
CGGCAGATTT TCAACCTGAT CAAGAACGAA CAGCCGCAGA CGATCGCGTT TGTGCTCTCG
TATCTCGACG GGCACAAGGC CGCGGAGGTG TTCGGCTTGC TCGGGCCCGA TCTGCGCGAG
GAAGTGATCG AGCGGCTCGG CACCATCGAG TCCACCTCAC TCGATCTCGT CGGCAAGATC
GCCCGCAGCC TCGGCAAACA TTTCGACACG AAAGCGCGGC CGTCCTTCCA CCGCAGCGGC
GGCGTGCGCG CCGTCGCCGA TTTGCTGAAT CAGCTCGAAA AGGACATGAG CAAGACGCTC
CTGACGCGGC TCGAGGAGCG CAATGCCCAG CTGGGCGCCG CCATTCGCAA GAAGCTGTTC
AGCTTCGAGG ATCTGGGCCG CCTGTTGCCG GCGGACCTGC AGCGCGTGCT GCGCGAAGTG
GATTCTTCGA GCCTGGCGGT CGCGATGAAA TCCGCGAGCG AGAGCCTGCG CGACAAGTTC
TACGCGGCGA TCTCGAAGCG CGCGGGCGAA AGCCTTCGCG AGGAAATCGA AATGCTCGGG
CCCGTCCGGC TCAAGGACGT CGAGGCCGCT CAGGATGCCA TCATCCAGGT GGTTCGCCGG
CTCGAGGAAG AAGGGCAGAT CACGCTCGAT GCCGATGCGA GCGAGAGCCT CGTCACGTAA
 
Protein sequence
MPDLDFVKAN RQQKLAIFLV VIGPEAAANI LKHFEEPEIE LLCREMSQLT MIPEAMQKQA 
LEEFAGLIAA SHSSALGGLD YAQRTLEIAK GDYKASAIIS RVGPVGTSVD VIREISDMEG
RQIFNLIKNE QPQTIAFVLS YLDGHKAAEV FGLLGPDLRE EVIERLGTIE STSLDLVGKI
ARSLGKHFDT KARPSFHRSG GVRAVADLLN QLEKDMSKTL LTRLEERNAQ LGAAIRKKLF
SFEDLGRLLP ADLQRVLREV DSSSLAVAMK SASESLRDKF YAAISKRAGE SLREEIEMLG
PVRLKDVEAA QDAIIQVVRR LEEEGQITLD ADASESLVT