| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_0411 |
|---|
| Symbol | |
|---|
| ID | 6204204 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | - |
|---|
| Start bp | 489182 |
|---|
| End bp | 489436 |
|---|
| Gene Length | 255 bp |
|---|
| Protein Length | 84 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 641690033 |
|---|
| Product | flagellar motor switch protein FliN |
|---|
| Protein accession | YP_001817301 |
|---|
| Protein GI | 182412235 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1886] Flagellar motor switch/type III secretory pathway protein |
|---|
| TIGRFAM ID | [TIGR02480] flagellar motor switch protein FliN |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.860809 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGAAA AAGCCCTTGA TATCGTGCTC GACGTGAAGG TGAAGGTCAC CGTCCAGCTC
GGTTCCGTCC AGTTGCCGAT GCGGGAGGTG CTCGAACTCT CACCCGGCTC GGTCGTGCAG
CTCACGCAGC ACGCGAGCGA TCCGGTCGGC TTGTTCGTGA ACGACCAGCT CGTGGCCTAC
GGCGAGGTGG TGGTCGTCGA AGACAACTTC GGCATCAAGA TCACGGAGCT CGTCGGGAGC
GAGAAGGCGC CGTGA
|
|---|
| Protein sequence | MEEKALDIVL DVKVKVTVQL GSVQLPMREV LELSPGSVVQ LTQHASDPVG LFVNDQLVAY
GEVVVVEDNF GIKITELVGS EKAP
|
|---|
| |