| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_0405 |
|---|
| Symbol | |
|---|
| ID | 6205402 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | - |
|---|
| Start bp | 483147 |
|---|
| End bp | 485285 |
|---|
| Gene Length | 2139 bp |
|---|
| Protein Length | 712 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641690027 |
|---|
| Product | flagellar biosynthesis protein FlhA |
|---|
| Protein accession | YP_001817295 |
|---|
| Protein GI | 182412229 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1298] Flagellar biosynthesis pathway, component FlhA |
|---|
| TIGRFAM ID | [TIGR01398] flagellar biosynthesis protein FlhA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.245167 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCGCG CCGATCTGGT TTTGACGGCC GGTCTGTTCA TCACCGTCCT GCTGCTGATC
CTGCCGATCC CGACGGTGCT GCTGGATTTC TTTTTCGCGC TGAACATCGG GCTCTCGATG
CTGGTGCTGC TGGCGATCAT CTACATCAAG GACCCGCCCG AGTTCTCGAG CTTTCCGACC
TTGCTGCTGG CGCTGACGCT CTTCCGGCTT GCGCTCAACA TCAGCTCGAC CCGGCTCGTG
CTCGTCAAAG GCTACGCCGG CCAGGTCATC GACGCGTTTG GCCACTTCGT CATTCAGGGC
AATTACATCG TCGGTGCGGT CGTATTCCTC ATTCTCGTGG TGATCAATTT CGTGGTCATC
ACCAAGGGCG CGGGTCGTAT CGCCGAGGTC AGCGCGCGGT TCACGCTCGA TGCGCTGCCC
GGCAAGCAGA TGGCGATCGA TGCCGAGCTC AACGCCGGCA TCATCGACGA AGTCCAGGCC
ACCGCGCGCC GTGTCAAGGT GCAGAAAGAA GCCGACTTCT ACGGCGCGAT GGACGGCGCC
TCGAAGTTCG TACGCGGCGA TGCGATTGCC GGCATCATCA TCACGCTGGT CAACGTCATC
GGCGGTTTCG CCATTGGCGT GCTGCAGATG GGTCTTTCCC TTGGCGAATC GCTGCAGAAA
TTCACGCTGC TGTCCATCGG TGACGGCCTG GTGTCCCAGA TTCCCTCGCT CGTGCTGTCG
GTCGCGGCGG GTGTCCTCGT TACTCGCGCC TCGGAGAACA ACAACCTCGG TCACCAACTC
GCCGGCCAGA TGTTCCGGTA TCCGCGCGCG ATGAAAATCG CCGCCGGCAT GCTGATGTGC
TTCGGCATCA TGCCGGGCAT GCCGCTGCTG CCGTTCGCCG GGCTCGCGGC TTTCTCGTGG
TTCCTCGGCA AGATGCTGAA GGATCAGGAA GACAAGACCG GGCACGCGCT CGGCGCCGAG
GCCGCCGCGG CTGAGAAGGC CGCTGCCGGC AAGAGCGCGG GCAAAGGTGC GGCGGGCGGC
GCCGCCGGCG CCGCCGCGCC CGCCAGCGGT CCCACCGAGG ATGTGCGCAA GCTCATCGAA
GTGGATGTCT TCGCGATCGA GCTGGGCTAT GGACTGCTGA ATCTCGCCAA CGCCAAGGCC
GGCGGCGATC TGCTCGCTCG CGTCACGGGC GTGCGGAAGA CGCTCGCCCG CGAAAAGGGC
ATCGTGGTGC CGCCAGTGGC GGTCCGCGAC AATCTCGAGC TCGAGCCCAA CGACTATCGT
TTCCTGCTCC GCGGCAAGGC GCTCGCGCGC GGTCAGCTGC ATCCGAACCG CTGGCTCGCG
ATGAACGTCG CCGCCAGCAA GGTCCGGTTG CGCGGCGTGC CCACGCACGA ACCCGTTTTC
AACCTGGAGG CGACCTGGAT CGACGAGCCC GAGAAAAAGA CGGCTGAGAT CAACGGCTAC
ACCGTGGTCG ATCCCGCATC CGTGCTCATC ACCCACCTCT CCGAGACGCT GAAAGCCAAC
GCCCATCACC TGCTCGGCCG GCAGGAGGTG CAGTCGCTCG TCGACTTCCT CAAGCAGACG
CAGCCGGCCC TCGTCGCTGA GCTCTTGCCT GATCTCGTCA CGCTCGGCAT TATCCAGCGC
GTCCTGCAGA ACCTCCTCCG CGAAAACATT TCCATCGTCA ACCTGCCGCT CATCCTCGAG
GGCATTGGCG ATTTTGCTTC GCTCTCCAAG AACCCGGACG ACCTCAGCGA ACTCATTCGC
CGGCGGCTCG GGCTGTATTT TGTTCCCGAA TTCGAAGTGC GGCCCGGCGT GGTGCGTGCC
GTCACGGTCG ATCCGCGGTT CGAACAGTGG CTCGGCACGA AGGTGCAGCG CTCACCGACC
GAAGTGGGCC TGGCGCTGGA TCCCGCGACC ACCCGGCACG TGCTGGACGA GCTCAACCGC
CGCATCGCCG AGCTCACCGC GCAGGGCCAT CCCACGGTCC TCGTGGTGTC GAGCGAAGTG
CGGCTGCCGC TCAAGCGTTT CTTCGAGTCC TCCTTCCCGC GGCTCACGGT GCTGGCGTTC
CAGGAGCTGC CGGCCGCCAC CGAAATCGAA AACGCCGGGA TCGTGCCCGT GCCGGCGCAC
CTCGCGCGCA CGGAGACGCC ACTTAAAGCC GCCGCGTGA
|
|---|
| Protein sequence | MKRADLVLTA GLFITVLLLI LPIPTVLLDF FFALNIGLSM LVLLAIIYIK DPPEFSSFPT
LLLALTLFRL ALNISSTRLV LVKGYAGQVI DAFGHFVIQG NYIVGAVVFL ILVVINFVVI
TKGAGRIAEV SARFTLDALP GKQMAIDAEL NAGIIDEVQA TARRVKVQKE ADFYGAMDGA
SKFVRGDAIA GIIITLVNVI GGFAIGVLQM GLSLGESLQK FTLLSIGDGL VSQIPSLVLS
VAAGVLVTRA SENNNLGHQL AGQMFRYPRA MKIAAGMLMC FGIMPGMPLL PFAGLAAFSW
FLGKMLKDQE DKTGHALGAE AAAAEKAAAG KSAGKGAAGG AAGAAAPASG PTEDVRKLIE
VDVFAIELGY GLLNLANAKA GGDLLARVTG VRKTLAREKG IVVPPVAVRD NLELEPNDYR
FLLRGKALAR GQLHPNRWLA MNVAASKVRL RGVPTHEPVF NLEATWIDEP EKKTAEINGY
TVVDPASVLI THLSETLKAN AHHLLGRQEV QSLVDFLKQT QPALVAELLP DLVTLGIIQR
VLQNLLRENI SIVNLPLILE GIGDFASLSK NPDDLSELIR RRLGLYFVPE FEVRPGVVRA
VTVDPRFEQW LGTKVQRSPT EVGLALDPAT TRHVLDELNR RIAELTAQGH PTVLVVSSEV
RLPLKRFFES SFPRLTVLAF QELPAATEIE NAGIVPVPAH LARTETPLKA AA
|
|---|
| |