| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_0402 |
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| Symbol | |
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| ID | 6208413 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 480805 |
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| End bp | 481593 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641690024 |
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| Product | RNA polymerase, sigma 28 subunit, FliA/WhiG |
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| Protein accession | YP_001817292 |
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| Protein GI | 182412226 |
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| COG category | [K] Transcription |
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| COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
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| TIGRFAM ID | [TIGR02479] RNA polymerase sigma factor, FliA/WhiG family
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTCGA CCGTCGCTTC AGGCAAGGAT GCCGCTCCCA AGACAGTCTG GCGCGCCTAT
CAAGGCGTTT CGCCCAGCAA CGTCGATGAG AAGGATCTGA TCGAGCGCCA CCTCTACCTC
GTCCGCAACG TAGTCGACCG GATCAAACTG AATCTGCCGA CGCATATCGA TGCTGACGAC
CTCTACAGCG TGGGCGTCAC CGGCCTGATC GCGGCGGTCC GCAAGTTCGA CCCGGAGCAG
GGGTGCACCT TCGCCAGCTA CGCCGCCATG CGTATCCGCG GCGCCGTGTT GGACGAGCTG
CGGCGGATGG ACTGGTGTCC GCGCCGCGCC CGCGCCCGCT CGCGCAAGCT CAAGGAGACC
ATCATTGAGG TGGAGCAGAA GCTCGGTCGC GCGGCGAGCG ACGAGGAAAT CTGTTCCGCC
CTCGGGCTGA CGCAGAAGGA TTATGCGAAG TGGGTCGAGG ATGCCCGGCC GGTGACCTTC
CTCGCGATCG ATCACCGCAA CGAGAACGAG GATGGCGAAG GCGCTTCCCT GCACGAGTTG
CTCAAGGACG AGACCGACGT CACCGGTCGC GAAAACCTCG AGAAGCGCGA GCTGCTGGAG
CTTCTGACTC AACGAATCTC CGAATTGCCC GATATACCGA AGAAGATCCT CGCCATGTAT
TACTTCGAGA ACATGCGCCT GGCGGAAATC GCGGCCGTTT TCAACCTCAC GGAGTCGCGC
ATCTGCCAGA TTCACGCTCA GACCATCCTC GGTCTGCGCG GCTACCTCGG CCGCGCGCGC
AATCGCTAA
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| Protein sequence | MNSTVASGKD AAPKTVWRAY QGVSPSNVDE KDLIERHLYL VRNVVDRIKL NLPTHIDADD
LYSVGVTGLI AAVRKFDPEQ GCTFASYAAM RIRGAVLDEL RRMDWCPRRA RARSRKLKET
IIEVEQKLGR AASDEEICSA LGLTQKDYAK WVEDARPVTF LAIDHRNENE DGEGASLHEL
LKDETDVTGR ENLEKRELLE LLTQRISELP DIPKKILAMY YFENMRLAEI AAVFNLTESR
ICQIHAQTIL GLRGYLGRAR NR
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