| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_0394 |
|---|
| Symbol | |
|---|
| ID | 6204697 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | - |
|---|
| Start bp | 474066 |
|---|
| End bp | 475202 |
|---|
| Gene Length | 1137 bp |
|---|
| Protein Length | 378 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641690016 |
|---|
| Product | flagellar P-ring protein |
|---|
| Protein accession | YP_001817284 |
|---|
| Protein GI | 182412218 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG1706] Flagellar basal-body P-ring protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0514922 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCCAG CACGACGCAC TTTCACGAAG ATGGCCCGCA GCAGCGAGCG GTGGATTCTC
ACCGCGATAC TGGGCCTGTT GTGCTCGGCG TCGGGGCACG CGTCCCGCGT CAAGGACCTC
ACCCTCGTCG AGGGCGGTCG CGACAACCAG ATCGTCGGCT ACGGCATCGT GGCCGGACTG
GCGGGTGACG GCGACAGCAA CGCGCAGGCG ACGCTGCGCA GCGTCGCGAA TATTCTCCAG
CGTTACGGCG TTGTGGTGAG CCCGACGGAT ATCAAGGCGA AGAACGCCGC GGCCGTGATG
GTCACCGCCG ACATCGGCCC CTTCCTGAAA CCCGGCTCGC GAATCGACGT CAACGTGGCT
TCGCTCGGCG ATGCGAAATC GCTGCAGGGT GGGGTGCTGC TCCAGACGCC GCTCATCGGC
GGCGATGGCA AGGTCTACGC GGTCGCGCAG GGCGCGGTGG CGGTCGGCGG ATTTCTCGGC
GGCGCGGGCG GCGCCGGCGG CGCAACCGTC CAGAAGAATC ACCCGACGGT GGGCGTGATC
AGCAACGGCG GCATCGTTGA GCGCGAGATC GCGGCGACCT TCGTCCGCGA CAACCAGCTG
CGGCTGTTGC TGCACAATCC GGATTTCACC TCCGCGGCGC GGATGGCGGA CGCGATCAAC
GGCAAGTGGC CGGCCATGGC CTCGGCCGTC GATGCGGCGA CGATCGCGGT CAGCCTGCCG
GCCAACTATG CGGGGCAGGA CGTCGCCTTC ATCGCTGACC TCGGCATGAT CGAAGTCGTG
CCCGATACGC TGGCCCGCGT CGTGATCAAC GAGCGCACCG GCACGATTGT CGCCACGTCC
ACGGTCCGAC TCTCGCAGGT CGCGATCGCG CTCGGCTCGC TGACGATCAC CGTGAGCTCC
AACATGGGCG CGAGCCAGCC CAACGCGTTC GGCGCGGGCC AGACGGTGCC GCTGCAGAGC
ACGCAGACGA ACGTCAACGA GGTCAAAGGC GGCTTCACGG TGTTGAATGA GCCGCCGACG
ATCGAACGCC TGGCCGCCGC GCTGAACGCG CTCGGCGTCT CGACTCGCGA GATGATGGCG
ATTTTCCAAA GCCTGAAACG CTCGGGCGCG CTCCAAGCCG AGCTGGTGAT CAACTGA
|
|---|
| Protein sequence | MNPARRTFTK MARSSERWIL TAILGLLCSA SGHASRVKDL TLVEGGRDNQ IVGYGIVAGL
AGDGDSNAQA TLRSVANILQ RYGVVVSPTD IKAKNAAAVM VTADIGPFLK PGSRIDVNVA
SLGDAKSLQG GVLLQTPLIG GDGKVYAVAQ GAVAVGGFLG GAGGAGGATV QKNHPTVGVI
SNGGIVEREI AATFVRDNQL RLLLHNPDFT SAARMADAIN GKWPAMASAV DAATIAVSLP
ANYAGQDVAF IADLGMIEVV PDTLARVVIN ERTGTIVATS TVRLSQVAIA LGSLTITVSS
NMGASQPNAF GAGQTVPLQS TQTNVNEVKG GFTVLNEPPT IERLAAALNA LGVSTREMMA
IFQSLKRSGA LQAELVIN
|
|---|
| |