Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_0388 |
Symbol | |
ID | 6204262 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | - |
Start bp | 470011 |
End bp | 470280 |
Gene Length | 270 bp |
Protein Length | 89 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641690010 |
Product | carbon storage regulator, CsrA |
Protein accession | YP_001817278 |
Protein GI | 182412212 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1551] Carbon storage regulator (could also regulate swarming and quorum sensing) |
TIGRFAM ID | [TIGR00202] carbon storage regulator (csrA) |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.224817 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.888078 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCGTCC TTTCGCGCAA AGTCAACGAA GCGATCGTCA TTGGTGACTC GATTGAGATC AAGATCACCC GGATCGAGGG CGACTTTGTG AAGATTGGGA TCTCCGCCCC GCGCGACGTT CCCATCTTTC GCAAGGAAGT TCTCGCCGCG ATCGCCGCCA GCAACCAGGC CGCCGCCGTC CGTGCGGATG CCCTGCCCAA ACTCCCCGTC GCCGCCAAGG CGCCGGCCAA ACCCGCCCCC GCCGGCTCGC CGTCGGGCTC GCAAACCTGA
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Protein sequence | MLVLSRKVNE AIVIGDSIEI KITRIEGDFV KIGISAPRDV PIFRKEVLAA IAASNQAAAV RADALPKLPV AAKAPAKPAP AGSPSGSQT
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