Gene Oter_0388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_0388 
Symbol 
ID6204262 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp470011 
End bp470280 
Gene Length270 bp 
Protein Length89 aa 
Translation table11 
GC content65% 
IMG OID641690010 
Productcarbon storage regulator, CsrA 
Protein accessionYP_001817278 
Protein GI182412212 
COG category[T] Signal transduction mechanisms 
COG ID[COG1551] Carbon storage regulator (could also regulate swarming and quorum sensing) 
TIGRFAM ID[TIGR00202] carbon storage regulator (csrA) 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.224817 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.888078 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGTCC TTTCGCGCAA AGTCAACGAA GCGATCGTCA TTGGTGACTC GATTGAGATC 
AAGATCACCC GGATCGAGGG CGACTTTGTG AAGATTGGGA TCTCCGCCCC GCGCGACGTT
CCCATCTTTC GCAAGGAAGT TCTCGCCGCG ATCGCCGCCA GCAACCAGGC CGCCGCCGTC
CGTGCGGATG CCCTGCCCAA ACTCCCCGTC GCCGCCAAGG CGCCGGCCAA ACCCGCCCCC
GCCGGCTCGC CGTCGGGCTC GCAAACCTGA
 
Protein sequence
MLVLSRKVNE AIVIGDSIEI KITRIEGDFV KIGISAPRDV PIFRKEVLAA IAASNQAAAV 
RADALPKLPV AAKAPAKPAP AGSPSGSQT