| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_0380 |
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| Symbol | |
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| ID | 6205087 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 457516 |
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| End bp | 458766 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641690002 |
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| Product | pectate lyase |
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| Protein accession | YP_001817270 |
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| Protein GI | 182412204 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02474] pectate lyase, PelA/Pel-15E family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.557218 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCACCCC GCTGGCTATC CTGCCTGATT CTCACCAGTG TCGTCACCTC AGGGTTGGTG
CAGGCTGCAC CGCCGCCGCG TGGCTGGCCC GCCGAGCCCT TTGCTCCGCT TACGCCGGAG
CGGATTGCGG CCCTGCCGGC GGCCGAGCGC GCCGCGTGGG AAACGTATTG GCAGCAGTCG
GAGCGGCTCG CGAGCGAGCT GCCCGCGCGG GCCCACGCCG ACGCCTCGCC GCTGCAGCCA
ATGTCCGGTC CGCCGAAGGG CGGCATTCAC AGCAAGGGCC TCCGGCTCGA AGCGCCAACA
GCGTGGTATG CGACCGAAGA GGCGCGCGCG GTCGCCAACC GTGTGGTCGC CGGTCAGCTC
GAGATCGGCG GCTGGCCGAA GGGCCGGGAT TATTCCCGCG ACCTCGATCC AGACCGGGCG
CGTCCCGCCG GCTCGGACGG CGCCACGTTC GACAACAACG CGACGATTTC GGAGCTGCAC
TATCTCGCGG AGGCGATCAC CGCGGCGCCC GGCGACCCAC GCGCCACGAA GTGGAGCGCC
GGGTTCGAGC GCGGCCTGCG CTACCTCTTC GCAGCGCAAT ATCCACATGG CGGATTCCCG
CAGTATTATC CGTTAATCGG TGGTTATCAC GACGGCGTGA CGTTCAACGA CGACGCGATG
ACCAACGTGC TCGAGCTGCT GCGCGATGTC GGCGCCGGTG CAGCGCCCTT TGCGTTCGTG
CCGCCGGAAC TGCGCCAGGC AAGCGCGGCG CGGTTCCAGC GCGGCGTCGC GTGCACGCTG
GCCACGCAGC TGCGCGACGC GAACGGCCGC CGGACCGTCT GGTGCCAGCA GTATGATCCG
CTCACCTTGC GGGCGGCCGC GGCGCGGAAC TTCGAGCCGA TCGCCGATGC ATCGCGGGAG
AGCGCGCGAG TCGTGCTCAT GCTCATGCGC CTGCCCGATC CTTCGCCGGA GGTGCGGGAG
GCGGTCGAGG GCGCGGTCGC CTGGTTCCGG CGGACCGCAT TGCACGATTT GAAAGTCCGG
CGCGCGCCGG GCGACACGCG CGGCGAGGCG ATACCGGCGC CCGGTGCGCC GCCCCTCTGG
GCGCGTTTCT ACGAACCGGG CACCACGACC CCGATCTTTG GCGACCGCGA TCGCACGATC
CATTACGATC TCGCGGAAGT TTCGGCGGAG CGGATCGCCG GGTATACGTG GTATACGGAC
GCGCCCGCGA GCGTGTTGCG CCGTTATGAA AAGTGGCAGG CGCGACGCTG A
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| Protein sequence | MSPRWLSCLI LTSVVTSGLV QAAPPPRGWP AEPFAPLTPE RIAALPAAER AAWETYWQQS
ERLASELPAR AHADASPLQP MSGPPKGGIH SKGLRLEAPT AWYATEEARA VANRVVAGQL
EIGGWPKGRD YSRDLDPDRA RPAGSDGATF DNNATISELH YLAEAITAAP GDPRATKWSA
GFERGLRYLF AAQYPHGGFP QYYPLIGGYH DGVTFNDDAM TNVLELLRDV GAGAAPFAFV
PPELRQASAA RFQRGVACTL ATQLRDANGR RTVWCQQYDP LTLRAAAARN FEPIADASRE
SARVVLMLMR LPDPSPEVRE AVEGAVAWFR RTALHDLKVR RAPGDTRGEA IPAPGAPPLW
ARFYEPGTTT PIFGDRDRTI HYDLAEVSAE RIAGYTWYTD APASVLRRYE KWQARR
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