Gene Oter_0365 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_0365 
Symbol 
ID6208710 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp438596 
End bp439123 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content66% 
IMG OID641689987 
ProductCheW protein 
Protein accessionYP_001817255 
Protein GI182412189 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0835] Chemotaxis signal transduction protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.278695 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00626903 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGCTCCTC CACTTTCATC TCCCTCCGTC GGCACGACGA CGAAGTATCT CATGGTTACG 
CTCGCCGACG AAAGCTACGG CATCGTCGTC AGCCGCGTGC GCGAGATCAT CCGACTGCAA
AAAATCACCG CCGTGCCGCA GCTGCCGGAC TACGTCCGCG GCGTCATCAA TCTGCGCGGC
CGGGTGATCC CGGTCATCGA CCTGCGCACG AAGTTCAACC TGCCGGCCGT GTTCGCCGAT
CGCACATGCA TCGTCGTCGT GCAGGTCCGG CCGGGCGGCC GCGACGTCCT GCTGGGACTG
GTCGTCGATA ACGTCGAGGA GGTCACCAAT CTGGCGGCGG ACGACATCGA GCCTACGCCC
GAGTTTGGCG CCGTGATCGC CACCGAATAC CTGCTCGGGC TCGCGCGCGT GAAGGGCGCC
GTGAAGATCC TCCTCGATCT CGACCGCGTG GTCGCTCCCG ACGCGATGCA GACGATCCTC
CCCGCGGCCG CAGCCGCCGT CACCCCTCTT GCCCGCTCTT TGACATGA
 
Protein sequence
MAPPLSSPSV GTTTKYLMVT LADESYGIVV SRVREIIRLQ KITAVPQLPD YVRGVINLRG 
RVIPVIDLRT KFNLPAVFAD RTCIVVVQVR PGGRDVLLGL VVDNVEEVTN LAADDIEPTP
EFGAVIATEY LLGLARVKGA VKILLDLDRV VAPDAMQTIL PAAAAAVTPL ARSLT