| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_0313 |
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| Symbol | |
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| ID | 6207450 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 362750 |
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| End bp | 365413 |
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| Gene Length | 2664 bp |
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| Protein Length | 887 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641689935 |
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| Product | immunoglobulin I-set domain-containing protein |
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| Protein accession | YP_001817203 |
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| Protein GI | 182412137 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01451] conserved repeat domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.488254 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.343901 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCAGT TTTCTTCATT TTGTCGCTTC TTCGCAGGGA CGCTCCTGGC CTGCTTACCG
GCTGCACTGA CCGCGCAACA GACCATCACC GGCACCCCCG GCCAGGTGGG CGCGAACTAC
AGCTTTCAGG TGACGTCGAC GGCGACTCCA CCGGTGCAAT ACCAAGCCAC CGGACTGCCT
GCCGGGCTGG CGATCAACGC GAGTTCCGGG TTGATCACCG GCATGCCGAC GACCCCGGGG
ACGAGTCTTG GCGACGTCTC GGTCACGAGC AATGGGCAGA CCAACCACGC GGCGATCTCG
ATCACGATTG TGGCGGCATC GGGCACGTCC ATTATCACCA GCTCAACCAC CGCGAATGGC
ACGGTCGGCC AAGCGTTCAG CTACACCGTC ACCGGGAGCA ATGCGCCGAC GAGTTTCAAC
GTGTCCGGGC TGCCGGCTCA GCTCGTAGCA GATACGAACA CGGGCGCGAT CAGTGGGGTG
CCCGCGACGG CAGGAACGTA TTCCATTGCG CTCAGCGGCA ACAATGCGAG TGGTACGGGA
GCCCCCGTGA CCCTCACCCT TACGGTGGCT GCTCCGGCCG CGGCACCAGT GATCACGAGT
CCGACCAGCG CGGCGGTGGC TGTCGGCGCC CCTTTTAGCT ACACGATCAC CGCCACGAAC
ACGCCGAGTT CCTTTGCCGC GGCGGGACGG CCATTGGGGG TGGATCTGGA TTCGGCAACC
GGCGCGCTGA GCGGCACGTC GTCCATCGCC GGCGTCTATA CGATGGCGCT GACCGCGACC
AACGGAAACG GCACCAGCGC CCCGGTGAAT CTGGTGCTTA CGGTGGGCTC ACTGCCAGCC
ATCACCAGCG CCACCACGGT GCTGGCCAGC GTCGGTCAGC CGTTCAGCTA CGCGACACTC
GCGAGCGCAG CTGCGACCAG TTTCAACGTC AGCGGTTTGC CGCCCGGACT CACCGCCACG
CCAGCTGGGG TTATTAGTGG CACGCCGACG TCAGCGGGCG TTTTTCCCAT CCAGCTGAGC
GCCAACAACA CCGTCGGAAC GGGCCCGAGT ACCACCCTGA CGCTGACGAC CGGCGAACGG
CCGGCGATCA CCAGCGCCAG CTCTGCGAGC GGCAAGATCG GGACCGCCTT CTCCTATCAA
ATCACGGCTA CTGGCACGCC GACGAGCTAT GCGGCGGCTG GATTGCCGGC GACACTCTCG
TTGGATGCAG CCACTGGGCT GATCAGTGGG ACGCCGACGG GCACGGGAAC TCACTCGGTT
TCGCTCACCG CCACAAACCT GTTTGGTGCC GGTGAGGCCA AGACGCTGAC GATTCAGATC
GGCTCATCGG GAGGAGGTGG CGGCGGGGGA GGTGGAGGAG GTGCCGGCGG TGGTGGCGGC
TGGCCAATTA TCCTCAACGA AACCGCGGTG AACGCGTTGG TTGGGGTGCC CTTCGAACTG
CAAATCAAGA CATCGATCCC AGCGATGCAC TTTGAAGCAG TCGGGCTTCC AGAAGCGGTC
TCGCTTAGTG AGCGGACCGG TTTGATCTCA GGCACGTTCA CCGCTCCCGG AATCTACAAT
GTCGATTTGG CGGCCACGAA TCTTGGCGGG ACTCACCGTC GGATGATCAC GATCACCGCC
AGCGTGCTTC CGGTGTTTAC GCTTCAGCCG CAAGGAGCGT CCGTGGACCT CGGCGCCAAG
ATTGTTTTGA GCGGCGCGGC CACAGGCACG CCCACGCCGA CTTATCAGTG GTTGAAAAAT
GGATCCGCCA TTCCCGGCGC GACCGACGCC TCCTTCACCA TCGCCAGTTT TCAAGCCGCC
GACGCGGGAT CCTATGTCTT GGTGGCCACC AACGCGGGCG GATCCACCTC AAGCGCGGCG
GCCGTGCTCG GTGTTCACAC CACCGCCAAG GTTGTGGGCT TGGGCAAGGT CGTCGGTGAG
GACATCAAAC ATCCCAACGG AAATACCTTC GATCAGGTAC TGATCACCGG GACTACCGCC
ACCATCACCG CGGACCCCGG CCAGATCACG CGCATGTCGT ACGTCGACCT CGACGATGAT
ATCGTCCAGA TCGAGTTCAG TGGCGCCGGA ACGGTCACGG TGAGCCTCGA GAATGCCACC
GGACCCGCCG TGGCGACAAA GTACAACCAA CCGGACATCA CCTATATGAA AGGTCACGCG
TCACTGGTCG TCTCTGGTGT GGACGAGACC ACCTATCTTT CCGTCTTCAG CGTGGGCACG
ATCACCGCGG TCAATCCAAC GCTCTTCAAG CCAGGCGAAA CCTACGACGG CATGGCCGAT
ATCGGACTGA TCTCGATTAG CAGCCGCGAC GGCAAAATGG CGTCCCTGCG CCTCGCCAAC
GCGTCCTTCT TCCGCGCGGC AGGCATGACC GGCATCAATG CCCCAGGGGT CACGGTCGTG
GGAGCAATCT ATGTCGGTGA ACTGACTGCG GATGCCGATG CCGAGCCGAT CCTAGTCTTC
GGCGGCACGG GTGATTTCCG CGTCACCGGC GGCGATCTTC ATCAGCTGAA CGGACGGGCG
GTGGAGGTCG ATGGCATCAG CAACGTGAGT TTCACGGCTG GAGCCACGTC GCACGGAGTG
GCTTTACCGG CCCAAGCCAA CCGGGCGAAG TTCGAGAAGA ATGGAAAGGA TATCACCGGC
GATCTCGTGC CTCCTCCTCA TTAA
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| Protein sequence | MIQFSSFCRF FAGTLLACLP AALTAQQTIT GTPGQVGANY SFQVTSTATP PVQYQATGLP
AGLAINASSG LITGMPTTPG TSLGDVSVTS NGQTNHAAIS ITIVAASGTS IITSSTTANG
TVGQAFSYTV TGSNAPTSFN VSGLPAQLVA DTNTGAISGV PATAGTYSIA LSGNNASGTG
APVTLTLTVA APAAAPVITS PTSAAVAVGA PFSYTITATN TPSSFAAAGR PLGVDLDSAT
GALSGTSSIA GVYTMALTAT NGNGTSAPVN LVLTVGSLPA ITSATTVLAS VGQPFSYATL
ASAAATSFNV SGLPPGLTAT PAGVISGTPT SAGVFPIQLS ANNTVGTGPS TTLTLTTGER
PAITSASSAS GKIGTAFSYQ ITATGTPTSY AAAGLPATLS LDAATGLISG TPTGTGTHSV
SLTATNLFGA GEAKTLTIQI GSSGGGGGGG GGGGAGGGGG WPIILNETAV NALVGVPFEL
QIKTSIPAMH FEAVGLPEAV SLSERTGLIS GTFTAPGIYN VDLAATNLGG THRRMITITA
SVLPVFTLQP QGASVDLGAK IVLSGAATGT PTPTYQWLKN GSAIPGATDA SFTIASFQAA
DAGSYVLVAT NAGGSTSSAA AVLGVHTTAK VVGLGKVVGE DIKHPNGNTF DQVLITGTTA
TITADPGQIT RMSYVDLDDD IVQIEFSGAG TVTVSLENAT GPAVATKYNQ PDITYMKGHA
SLVVSGVDET TYLSVFSVGT ITAVNPTLFK PGETYDGMAD IGLISISSRD GKMASLRLAN
ASFFRAAGMT GINAPGVTVV GAIYVGELTA DADAEPILVF GGTGDFRVTG GDLHQLNGRA
VEVDGISNVS FTAGATSHGV ALPAQANRAK FEKNGKDITG DLVPPPH
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